Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
seq4 98.7 1e-15
>seq1
Length=4470873
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| ||| | || || ||||| | || ||||| ||||| ||||| || ||
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| || || |||||||| ||||| ||||| || ||||| || | ||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||| ||||| || || |||| | | | | ||||| ||||| ||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||||| ||||||||||| || || || ||||||||||||||
Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| |||| || || ||||||||||| |||||||| || || || || | || ||
Sbjct 3798515 CACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCCTC 3798456
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
| ||||||||| || || ||||| ||||| ||||| | || | | |||||||||
Sbjct 3798455 CAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCTTG 3798396
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
||| || |||||| ||| | | | ||||| ||| || || || | || || || |
Sbjct 3798395 GATTTTGCTCTTGA-CGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTCT 3798337
Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || |||| || || || ||||| |||||
Sbjct 3798336 TTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| |||||||||||||||||| || ||||| | || || || ||||| || |||||
Sbjct 3797812 TCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAG 3797753
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||| || | || | | ||||||||| |||||| ||||| |||
Sbjct 3797752 ATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTT 3797694
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | ||| || || ||||| || || | |||||||| || || ||
Sbjct 3797693 GTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTCTTTCCGGT 3797646
>seq4
Length=3720747
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| ||||||||||| || ||||| ||
Sbjct 362424 CGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 362483
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||| |||||||| |||| || |||||||||| ||| | | ||||||
Sbjct 362484 TCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTG 362543
Query 46499 TC 46500
||
Sbjct 362544 TC 362545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237389636360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |