Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq4 98.7 1e-15 >seq1 Length=4470873 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| ||| | || || ||||| | || ||||| ||||| ||||| || || Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || |||| || || |||||||| ||||| ||||| || ||||| || | || Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| || || |||| | | | | ||||| ||||| || Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| ||||||||||| || || || |||||||||||||| Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| |||| || || ||||||||||| |||||||| || || || || | || || Sbjct 3798515 CACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCCTC 3798456 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||||||||| || || ||||| ||||| ||||| | || | | ||||||||| Sbjct 3798455 CAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCTTG 3798396 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||| || |||||| ||| | | | ||||| ||| || || || | || || || | Sbjct 3798395 GATTTTGCTCTTGA-CGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTCT 3798337 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || |||| || || || ||||| ||||| Sbjct 3798336 TTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||||||||||||| || ||||| | || || || ||||| || ||||| Sbjct 3797812 TCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAG 3797753 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | || | | ||||||||| |||||| ||||| ||| Sbjct 3797752 ATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTT 3797694 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||| || || ||||| || || | |||||||| || || || Sbjct 3797693 GTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTCTTTCCGGT 3797646 >seq4 Length=3720747 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| ||||||||||| || ||||| || Sbjct 362424 CGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCG 362483 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| |||||||| |||| || |||||||||| ||| | | |||||| Sbjct 362484 TCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTG 362543 Query 46499 TC 46500 || Sbjct 362544 TC 362545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237389636360