Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq4 95.1 1e-14 seq3 84.2 2e-11 >seq1 Length=4470873 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || ||||||||||| ||||| | || ||||| || | Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| ||||| | ||||||||||| || ||| | || | Sbjct 3798138 GACACCATTGACAATG--TGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATC 3798195 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | ||| ||||| || || || |||| || || ||| || |||| Sbjct 3798196 AGCAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACA 3798255 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| |||||| | || || ||| | || ||| | || |||| || Sbjct 3798256 ACATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || || || ||| | || || ||| | | Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365 Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| ||||||| ||||| ||||| ||||| | |||| Sbjct 3798366 GACACTATCGACAACG--TCAAGAGCAAAATCCAAGACAAGGAGGGTATTCCACCTGACC 3798423 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | || ||||| ||| |||| || | || || || ||||||| Sbjct 3798424 AACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACA 3798483 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||||||||| || ||||| |||||||| Sbjct 3798484 ACATCCAAAAGGAAAGCACTCTGCACTTGGTGCT 3798517 >seq4 Length=3720747 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || ||||| || ||||||| || || || || | ||| || || ||||| || Sbjct 362545 GACAAGGAAGGAATCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAGCTCGAG 362486 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||||||| ||||||||||||||| ||||| |||| || ||| | || ||| Sbjct 362485 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCATCTCGTCCTG 362426 Query 38457 CG 38458 || Sbjct 362425 CG 362424 >seq3 Length=4123400 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| || ||| | |||||| | | Sbjct 1163116 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1163175 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| || ||||| || | ||||| || || | Sbjct 1163176 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTG 1163235 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || || || || || | || || || | |||||||||||| |||||| Sbjct 1163236 ATCTTTGCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAAG 1163295 Query 38433 G 38433 | Sbjct 1163296 G 1163296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171905941120