Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
seq4 95.1 1e-14
seq3 84.2 2e-11
>seq1
Length=4470873
Score = 102 bits (112), Expect = 8e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || ||||||||||| ||||| | || ||||| || |
Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137
Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| ||||| | ||||||||||| || ||| | || |
Sbjct 3798138 GACACCATTGACAATG--TGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATC 3798195
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || || | || | ||| ||||| || || || |||| || || ||| || ||||
Sbjct 3798196 AGCAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACA 3798255
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| |||||| | || || ||| | || ||| | || |||| ||
Sbjct 3798256 ACATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || || ||| | || || ||| | |
Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365
Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| ||||||| ||||| ||||| ||||| | ||||
Sbjct 3798366 GACACTATCGACAACG--TCAAGAGCAAAATCCAAGACAAGGAGGGTATTCCACCTGACC 3798423
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | || | || ||||| ||| |||| || | || || || |||||||
Sbjct 3798424 AACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACA 3798483
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||||||||||| || ||||| ||||||||
Sbjct 3798484 ACATCCAAAAGGAAAGCACTCTGCACTTGGTGCT 3798517
>seq4
Length=3720747
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| || ||||| || ||||||| || || || || | ||| || || ||||| ||
Sbjct 362545 GACAAGGAAGGAATCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAGCTCGAG 362486
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||||||| ||||||||||||||| ||||| |||| || ||| | || |||
Sbjct 362485 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCATCTCGTCCTG 362426
Query 38457 CG 38458
||
Sbjct 362425 CG 362424
>seq3
Length=4123400
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| || ||| | |||||| | |
Sbjct 1163116 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1163175
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| || ||||| || | ||||| || || |
Sbjct 1163176 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTG 1163235
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || || || || || || || | || || || | |||||||||||| ||||||
Sbjct 1163236 ATCTTTGCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAAG 1163295
Query 38433 G 38433
|
Sbjct 1163296 G 1163296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171905941120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |