Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 228 1e-54 seq1 84.2 3e-11 >seq2 Length=4294494 Score = 228 bits (252), Expect = 1e-54 Identities = 1133/1772 (64%), Gaps = 79/1772 (4%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TG 105639 ||| | | ||||||||||||||| || ||||| | || ||||| || || | || Sbjct 1335555 GCCATGGTTCGGAGATAGTACATGCCAGTCTTCAAACCCATCTTCCA-GCCAGCAAAGTG 1335613 Query 105640 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGA---TTCATACTTTGACT 105696 |||||| | || |||| ||| || || ||| ||| | | || | | |||| Sbjct 1335614 CATAGATGTGATCTTGCCCATGGTCGGC---TCCTTGAGATGGATGTTGAGAGATTGAGA 1335670 Query 105697 CTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTC 105756 ||| || |||||| |||||| | || ||||| | | |||| | ||||||| Sbjct 1335671 CTGATCGATGAAGGCACCACGGTCGGCAGCCATCTGCAAAACATTACGCTGGCTGATTTC 1335730 Query 105757 CCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGA 105816 ||| || || ||| ||| ||| |||||||| ||||| | | || || |||||||| Sbjct 1335731 CCAGACAGTCTTGTACAGAGCCTTCATATCATCAGGGATGTTGGGAATGTTCTGAATTGA 1335790 Query 105817 ACCCCCCGCCTTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTT 105873 || || | | | |||| | | |||||||| | ||||| || |||| | Sbjct 1335791 GCCACCATC---GGCAATGATACGGTTCTTCATATTGTCAGACCAGAGGCCAAGGTCGAC 1335847 Query 105874 GAGATCATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTC 105931 | || || | || ||| |||||| | || || || || | | || Sbjct 1335848 CAAGTCCTTCAACAGCCATGG--GTTGACGACTTGGAATTCACCAGCCAATACACGTCGA 1335905 Query 105932 AGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTG 105991 ||||||||| | ||||| || ||||||||||| || ||||||||||| || | || Sbjct 1335906 GAATAGATGTTGGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGATCTGGGAAGTC 1335965 Query 105992 GAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCT--TTTCC--TTGAT 106047 || || || ||||| || || | | ||| ||| || | ||| | || | || | Sbjct 1335966 GATGCAGTAGGCATAGGAGCGACAAGAAGGGAGTTGCGGATACCGTGCTTAGCAATTTCT 1336025 Query 106048 GCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCA 106105 || ||| || |||||||||| || | || || | || |||| |||| ||| Sbjct 1336026 GCTTTC----AGGCCATCCCAGTCCCAGAGGTCAGAA-GGAGTGACATTCC-ACATGTCA 1336079 Query 106106 AATTGAAGCAC-CCCT-TGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGG 106163 ||||||| | |||| || ||| || | |||||| | || ||||| | ||||| Sbjct 1336080 TATTGAAGGATGCCCTGTGAGACTGGGCTG--CCCTCATAGGTTTCATAAGTGCCTTGTT 1336137 Query 106164 CTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 106223 | | || | || || || || | ||||| || ||||| |||||||| | Sbjct 1336138 CCTTGGCGAGCTCGCAAGATGCTGTCAATGCGGCGTGGTAGATGGTCTCAAAGATCTGGA 1336197 Query 106224 CATTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATAC 106278 || | || ||||||| || || || | ||||| | || ||| | Sbjct 1336198 TGTTGAGCTGTCTGGCTTCTGGAGAGTCGAAAGGCAGACGTAGTGCCAGGAAAG-----C 1336252 Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 106338 ||| || |||||||| ||||| | ||| | ||||| |||| ||| || | ||| | Sbjct 1336253 ATCGGCAAGACCTTGGACACCAAGACCGACAGGTCGATGTCTCATGTT-GCTGTTCTTG- 1336310 Query 106339 AGTCTCAAC---GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 | |||||| ||| || | || || |||| ||| || ||| || |||| Sbjct 1336311 -GCCTCAACTACGGGGTAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACAAC 1336369 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 | || | ||||| || || | ||| | || | || | | | |||| | | Sbjct 1336370 TTGGGTAACCTCATGGAGGCGGCCAAAGTCATATTCGCCACTCGCCTGGTCGACAAAGGT 1336429 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 || || || | || || | |||||| |||||| |||||| |||||||| | Sbjct 1336430 CGGCAGTGCCAGGGAGGCAAGATTGCAGACAGCCACCTCATCAGGCGAAGTGTACTCGAC 1336489 Query 106516 AATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTT 106575 ||| || ||||||||||| || || ||| || ||||| ||||| ||||| ||||| | Sbjct 1336490 AATCTCCGTACACAAGTTTGAGCTTCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTC 1336549 Query 106576 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635 |||||| ||||||||||| | |||||||| || || ||||| ||||| | || || || Sbjct 1336550 GTTGCATGCATCCTTGTACAAGATGTAGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGGAT 1336609 Query 106636 TGCCTTCCACA-CATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 106692 || | ||||| | || | ||| || | || || | ||||| ||| |||||| Sbjct 1336610 AGCATACCACAGCTTCTG-GGCTTTGATGGTTTGACG--ACCACGTCCTTCCCGCTCGTA 1336666 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 || ||||| || || || | ||||| | || | ||||| || |||| || Sbjct 1336667 TTTCTCATAGAGAGCCTCGAATTTTTCACCATATACATCAGCAAGACCAGGCGCCTCGTG 1336726 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| |||| ||| | || |||||| |||||||||||||| || ||| | Sbjct 1336727 AGGGCAGAAGAGAGTCCAGTCCTGGTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGT 1336786 Query 106813 CCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 |||||| | | || || || | | ||| || | ||||| | || ||||| || | Sbjct 1336787 CCACAGCGCGTAGAAAAGGTCACGAGCACGGA-CTTCTTCTTTGCCGTGGTTCTTTCTCA 1336845 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 106931 | | | || || | || ||| || ||||||||||| || |||| |||| | || Sbjct 1336846 AGTTCAAAAAGTCAAAGACATCTGCATGCCATGGCTCGAGGTAGATGGCGAAGGCACC-- 1336903 Query 106932 TTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 | ||||| ||| | || | ||||| || || ||| ||| || || | |||| Sbjct 1336904 -TGGACGCTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCA 1336962 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 |||| || | ||||| || ||||| || || ||| || | | || | Sbjct 1336963 TTGGGATGAGACCATTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCAC--- 1337019 Query 107046 CATCATGGA-TGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 107100 ||| | || |||| |||||||| ||||| ||| ||||| ||||| Sbjct 1337020 --GAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGT 1337077 Query 107101 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 107160 | | || || |||||||||| | || ||||||||| || | || | |||||| Sbjct 1337078 CTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGA 1337137 Query 107161 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CA 107219 |||| || || || || ||||||||||| || || || | |||||| | || || Sbjct 1337138 AGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCA 1337197 Query 107220 TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGC 107279 | || ||||| || ||| ||||| | | | |||| ||| || || || || | Sbjct 1337198 CTTC-TGAGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATAC 1337256 Query 107280 CGATGGCCACACGCATAAACATGTATTGGGGT 107311 ||| | ||||||||| | ||||| ||| ||| Sbjct 1337257 CGACAGACACACGCATCAGCATGTGTTGTGGT 1337288 >seq1 Length=4470873 Score = 84.2 bits (92), Expect = 3e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 ||||| |||||||||||||||| ||| || || || | |||||| || || ||| Sbjct 336142 GCATCGATCTCATCAATGAAGATAATGCAGGGCGCGTTCTTCCGGGCGTTTGAGAAAAGA 336201 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491 || | || | | || ||||| ||||||||||| || || | | |||| | Sbjct 336202 TCTCTTACTCGGGATGGACCTACACCGACAAACATCTCGACGAACTCGGAACCGGAGACT 336261 Query 9492 TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551 | ||| || || |||||| || || |||| ||| || ||||||||||| ||| Sbjct 336262 GAGTAGAAAGGTACGCCAGATTCGCCTGCCGTGGCCTTGGCCAGCAGAGTCTTACCAGTA 336321 Query 9552 CCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 || || ||| | |||| ||||| || ||||||||||| || Sbjct 336322 CCGGGAGGACCAGATAGGATAGCACCTCGAGGAATCTTGGCACC 336365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979745409320