Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 3e-32
seq2 102 2e-16
seq4 86.0 1e-11
>seq1
Length=4470873
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | || | ||| |||||| || ||||| || ||||| || | || || |
Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || | |||||| ||||| ||||| | ||| |||||||| || ||||| || ||
Sbjct 3798463 CCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCC 3798404
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| ||||| ||||||||| || || |||||||| || ||||||||||||
Sbjct 3798403 TTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTA 3798344
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||||| |||||||| || ||||| | |||||
Sbjct 3798343 ATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| ||||||||||| ||||| ||||| || | |||||| | ||||||||
Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
| || || ||||| ||||| | ||||| ||||| ||||||||||| || ||||| |||
Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || ||||| || || ||| || || ||||| | |||||
Sbjct 3797938 ATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 3797879
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | ||||||
Sbjct 3797878 CCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||||| || || ||||||||||| || || || || |||||||| | ||||||| ||
Sbjct 3798293 TCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACC 3798234
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
||||| || ||||| ||||||||||| | |||||| || || || || || || |||||
Sbjct 3798233 GTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTT 3798174
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||||||||| ||| || || ||||||||||| || ||| ||||| || || |
Sbjct 3798173 GTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGAT 3798114
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || || | || || || || | ||||||
Sbjct 3798113 AGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 123 bits (136), Expect = 6e-23
Identities = 141/188 (75%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || || || |||||||| |||||||| ||| || || | ||||||||
Sbjct 3797830 ACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCA 3797771
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| |||||||||||||| || || || || |||||||| ||||| ||||| ||
Sbjct 3797770 AGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGG 3797711
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||| || || || || ||| ||| || ||||| || | |||
Sbjct 3797710 ATCTTGGACTTGACGTTGTCGATCGTATC---ACTGGATTCGACCTCAAGAGTGATGGTC 3797654
Query 195109 TTTCCTGT 195116
||||| ||
Sbjct 3797653 TTTCCGGT 3797646
>seq2
Length=4294494
Score = 102 bits (112), Expect = 2e-16
Identities = 195/283 (69%), Gaps = 6/283 (2%)
Strand=Plus/Minus
Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646
|||||||||| | |||||| | ||||||||||||||| | || | | || ||| |
Sbjct 1336803 TTTTCTACGCGCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACCAGGACT 1336744
Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706
||| || ||||| || | || |||||||| |||| |||||| |||||| | ||||
Sbjct 1336743 GGACTCTCTTCTGCCCTCACGAGGCGCCTGGTCTTGCTGATGTATATGGTGAAAAATTCG 1336684
Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAG--CCAAAAAGGTCGTGAAGGCCCA 160764
|| |||| ||||| | |||||| || ||| | | | ||| | | || |||||
Sbjct 1336683 AGGCTCTCTATGAGAAATACGAGCGGGAAGGACGTGGTCGTCAAA--CCATCAAAGCCCA 1336626
Query 160765 AGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATA 160824
| |||||| || ||||||| || || ||| || | |||| ||| ||
Sbjct 1336625 GAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGCACACCCTACATCTTGTA 1336566
Query 160825 CAAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGG 160866
|||||||| ||| || ||||| |||||||||||||| ||
Sbjct 1336565 CAAGGATG-CATGCAACGAGAAGAGCAACCAGAAGAACTTGGG 1336524
>seq4
Length=3720747
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || || ||||| || || || ||||| |||| || || | || || |||
Sbjct 362430 ACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 362489
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| || ||||| ||||| || || || ||||| ||||||
Sbjct 362490 AGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGTCT 362546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479567221681
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |