Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 154 3e-32 seq2 102 2e-16 seq4 86.0 1e-11 >seq1 Length=4470873 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || | ||| |||||| || ||||| || ||||| || | || || | Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | |||||| ||||| ||||| | ||| |||||||| || ||||| || || Sbjct 3798463 CCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCC 3798404 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| ||||| ||||||||| || || |||||||| || |||||||||||| Sbjct 3798403 TTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTA 3798344 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||||||| || ||||| | ||||| Sbjct 3798343 ATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||||||||| ||||| ||||| || | |||||| | |||||||| Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || || ||||| ||||| | ||||| ||||| ||||||||||| || ||||| ||| Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||| || || ||| || || ||||| | ||||| Sbjct 3797938 ATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 3797879 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 3797878 CCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||||| || || ||||||||||| || || || || |||||||| | ||||||| || Sbjct 3798293 TCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACC 3798234 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||| || ||||| ||||||||||| | |||||| || || || || || || ||||| Sbjct 3798233 GTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTT 3798174 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||||||||| ||| || || ||||||||||| || ||| ||||| || || | Sbjct 3798173 GTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGAT 3798114 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || | || || || || | |||||| Sbjct 3798113 AGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 123 bits (136), Expect = 6e-23 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || |||||||| |||||||| ||| || || | |||||||| Sbjct 3797830 ACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCA 3797771 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| |||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct 3797770 AGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGG 3797711 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| || || || || ||| ||| || ||||| || | ||| Sbjct 3797710 ATCTTGGACTTGACGTTGTCGATCGTATC---ACTGGATTCGACCTCAAGAGTGATGGTC 3797654 Query 195109 TTTCCTGT 195116 ||||| || Sbjct 3797653 TTTCCGGT 3797646 >seq2 Length=4294494 Score = 102 bits (112), Expect = 2e-16 Identities = 195/283 (69%), Gaps = 6/283 (2%) Strand=Plus/Minus Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646 |||||||||| | |||||| | ||||||||||||||| | || | | || ||| | Sbjct 1336803 TTTTCTACGCGCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACCAGGACT 1336744 Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706 ||| || ||||| || | || |||||||| |||| |||||| |||||| | |||| Sbjct 1336743 GGACTCTCTTCTGCCCTCACGAGGCGCCTGGTCTTGCTGATGTATATGGTGAAAAATTCG 1336684 Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAG--CCAAAAAGGTCGTGAAGGCCCA 160764 || |||| ||||| | |||||| || ||| | | | ||| | | || ||||| Sbjct 1336683 AGGCTCTCTATGAGAAATACGAGCGGGAAGGACGTGGTCGTCAAA--CCATCAAAGCCCA 1336626 Query 160765 AGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATA 160824 | |||||| || ||||||| || || ||| || | |||| ||| || Sbjct 1336625 GAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGCACACCCTACATCTTGTA 1336566 Query 160825 CAAGGATGCCATCTGTCG-CAAGAGTAACCAGAAGAACTTTGG 160866 |||||||| ||| || ||||| |||||||||||||| || Sbjct 1336565 CAAGGATG-CATGCAACGAGAAGAGCAACCAGAAGAACTTGGG 1336524 >seq4 Length=3720747 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||| || || || ||||| |||| || || | || || ||| Sbjct 362430 ACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 362489 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || ||||| ||||| || || || ||||| |||||| Sbjct 362490 AGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGTCT 362546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479567221681