Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 2e-15
seq3 82.4 5e-11
>seq1
Length=4470873
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | |||||||| || || ||||| ||||| || || | || |||| |||
Sbjct 3798514 ACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCCTCC 3798455
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || ||||| || | ||| || ||||| | || | |||||||||||
Sbjct 3798454 AACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCTTGG 3798395
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
|| || ||||| | | ||||| | ||| | |||||| || | ||| || ||
Sbjct 3798394 ATTTTGCTCTTGAC----GTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGT 3798339
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || | |||||| || ||||||||||||
Sbjct 3798338 CTTTCCAGTCAAAGTCTTGACGAAGATCTGCATA 3798305
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/210 (71%), Gaps = 10/210 (5%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| |||||||||||||| ||||| ||||| | || |||| || | ||
Sbjct 3798053 GTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTG 3797994
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||| || ||||| || | ||||||||||| | || | ||||||||||| ||||||
Sbjct 3797993 TTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTT 3797934
Query 34898 -CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| ||| || || | ||||| ||| | ||||| |||| ||| ||||| ||
Sbjct 3797933 GCTCTTT-AC--AT--TGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 3797879
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || ||||| || || || ||||||
Sbjct 3797878 CCGGTCAGGGTCTTGACGAAAATTTGCATA 3797849
>seq3
Length=4123400
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
|| |||||||| ||||| ||| |||| |||| || || || ||||||||||| ||
Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| |||||||||||| | || | || |||||||| ||||| ||||| || |
Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGAC--AT--T 1163179
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || | ||| || |||| ||| ||||| || |||||||| ||||| ||
Sbjct 1163178 GTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1163119
Query 34970 AAAG 34973
|||
Sbjct 1163118 GAAG 1163115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633034224504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |