Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 154 2e-32 seq7 89.7 6e-13 >seq2 Length=4294494 Score = 154 bits (170), Expect = 2e-32 Identities = 365/545 (67%), Gaps = 10/545 (2%) Strand=Plus/Plus Query 48263 TTCTTCATTGCCACTATTCCTTTT-AAGTTCAAGAAAGTCCATTATATCAGCATGCCATG 48321 |||||| ||||| ||| || | |||||||| |||||| | | ||| |||||||||| Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA-AAAGTCAAAGACATCTGCATGCCATG 1336878 Query 48322 GTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGG 48381 | || | || || || | ||||||| || || || || || || || | ||| | || Sbjct 1336879 GCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGGG 1336938 Query 48382 CAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCG 48441 |||| ||||| | ||||| | |||||||| | |||||| || | |||||||| || | Sbjct 1336939 CAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCGG 1336998 Query 48442 AAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCAT 48499 ||| || ||| |||| | || | | |||| | ||| ||||| || || | Sbjct 1336999 CAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTG--AGACCAATACCGCCAGCGGT 1337056 Query 48500 TTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTAT 48559 || || || | |||||| || || || ||||| || ||||| || || || || | Sbjct 1337057 CTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTT 1337116 Query 48560 CATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGT 48619 ||| | | || || || ||||| ||| || ||| ||||| | ||| || | || Sbjct 1337117 CATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGT 1337176 Query 48620 TGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATC 48679 ||||| || ||| |||| || |||| || | | || || || || || | || Sbjct 1337177 AGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTTC 1337234 Query 48680 TATATCCCATTG--ATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCA 48737 | | ||| | ||| ||||| | ||| |||||||| | ||| | ||| |||| |||| Sbjct 1337235 TCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTCA 1337294 Query 48738 ACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAG 48797 ||| || || || || | | ||||||| |||||| || || || ||||| || Sbjct 1337295 GCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGTAT 1337354 Query 48798 TTGTA 48802 | ||| Sbjct 1337355 TGGTA 1337359 >seq7 Length=2329771 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 19047 CCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAAC 19106 |||||| ||||| || ||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct 254302 CCAGAAGATAGAGGCGAATGAGCCAGAGAAGAAGATACCCTCAACTGCAGCGAAAGCAAC 254361 Query 19107 TAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTT 19166 |||| || || || | | || | ||||| ||||||||||| || ||||| Sbjct 254362 AAGTCGTTGAGCAAAAGACGAGTTCTTGTCGGAGATCCACTTCAGTGCCCAGTCGGCCTT 254421 Query 19167 CTTTTTTACACATGGCATTGTCTCTATAG 19195 ||| | |||||| ||||| || |||| Sbjct 254422 CTTGCGAATACATGGGATTGTGTCGATAG 254450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107795230520