Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 5e-24
seq1 104 2e-16
>seq2
Length=4294494
Score = 129 bits (142), Expect = 5e-24
Identities = 326/488 (67%), Gaps = 12/488 (2%)
Strand=Plus/Plus
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||| |||||||| |||||||| ||| |||| || || || | || | ||||| ||
Sbjct 1079187 GAAATCATTGCCAACGATCAAGGCAACCGAACCACCCCCTCGTTCGTCGCCTTCACCGAC 1079246
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174
||||| | | | | |||||||| ||||| | |||| | | || ||| || ||
Sbjct 1079247 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTCAGAACACA 1079306
Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234
|||| ||||| || || | ||||| ||| || || | |||||||| ||
Sbjct 1079307 GTTTTCGATGCCAAGCGACTGATTGGCCGAAAGTTCGCGGACGCTGAGGTTCAGGCTGAC 1079366
Query 550235 ATGAAGCATTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290
|||||||| | || ||| | || | || | | ||||| || ||||| | |
Sbjct 1079367 ATGAAGCACTTCCCATTCAAGGTCATCGACAAGGGT---GGAAAGCCAGTCATTGAGGTC 1079423
Query 550291 TACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | | |||| | || ||||| |||||||| |||| ||||| ||||| | |
Sbjct 1079424 GAGT--TCAAGGGCGAGAACAAGCAATTCACACCAGAAGAAATCTCATCCATGGTCCTGA 1079481
Query 550350 TGAAAATGAAACAAACAGCC-AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
|| |||| | | || ||| ||| || | |||| || | | ||||| ||
Sbjct 1079482 CCAAGATGAGAGAGACTGCCGAGTCCTATC-TTGGCGGCACTGTCAACAACGCAGTCATC 1079540
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || || ||||| || || ||||| |||||||||||||| || || ||||| | |||
Sbjct 1079541 ACAGTTCCCGCATACTTCAACGACTCTCAACGTCAAGCTACCAAGGACGCTGGTCTCATT 1079600
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || || ||||| || ||||| ||||| || ||||| || ||||| | || || ||
Sbjct 1079601 GCCGGCCTCAATGTGCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATCGCCTACGGT 1079660
Query 550529 CTTGATAA 550536
|| || ||
Sbjct 1079661 CTCGACAA 1079668
>seq1
Length=4470873
Score = 104 bits (114), Expect = 2e-16
Identities = 106/136 (78%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTC 563314
||||||||| |||||||| ||||| |||||| |||||||| || ||| || || |
Sbjct 3797840 GAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTC-GCTCAGGGTGC 3797782
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
|||||||||||| ||||| || || ||||| | ||||||||||||||||||||||
Sbjct 3797781 GGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTT 3797722
Query 563375 CTTTATCTTGAATTTT 563390
| || || || || ||
Sbjct 3797721 CCTTGTCCTGGATCTT 3797706
Score = 96.9 bits (106), Expect = 3e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| |||||||| ||||| ||| ||||| || | ||||| |
Sbjct 3798067 AGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGG 3798008
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| | |||||| || ||||| || | | |||||| || |||||||| || ||
Sbjct 3798007 CCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCC 3797948
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435
|| || ||||| || ||||| || || ||||||| || | | ||||| ||
Sbjct 3797947 TTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGAC-GATTCAACCTCGAGGGT 3797889
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| || || || || || || || |||||||||||||||
Sbjct 3797888 GATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCATA 3797849
Score = 95.1 bits (104), Expect = 1e-13
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
|| || |||||||| || ||| || || |||||||| | ||||||| |||
Sbjct 3798289 AGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCGTCT 3798230
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382
|| ||||| || || || || || | || ||||||||| || || || || ||||| |||
Sbjct 3798229 TCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTGTCT 3798170
Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGT 563441
|||||||| || || ||||| || |||| | || | | ||| || || | |||
Sbjct 3798169 TGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAG-GATTCGACTTCCAGTGTGATAGT 3798111
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| || ||||| || || || || |||||||||
Sbjct 3798110 TTTGCCCGTAAGGGTCTTGACAAAGATTTGCATA 3798077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029288437515070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |