Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=4470873 Score = 100 bits (110), Expect = 2e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 29986 CTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045 |||||||| || ||| | |||||||||| || || |||||||| || ||| Sbjct 3655169 CTCACGTAGAATTGAGCAAACATGTGGCACGGCGGGAGGGCCATGAGTTTCAGGTCGGCC 3655228 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 ||||||||||| | ||||||||| | ||| | |||||| || ||| | |||| Sbjct 3655229 ACGTTCCAGGCGCTGAGGATGATGCGGCGGTCGTAAGGGTTGGTCTTGAGTTTGCGCACG 3655288 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | | |||||| || ||| | ||| |||||| || || |||| Sbjct 3655289 ATCTCGGCGATCTGATCGACACCCTTGTCCGTGTAGTCCGCGTGGCAATCTTTGTAAGGG 3655348 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || ||||| || | ||| ||||| ||||| || || ||||| || || ||||| | |||| Sbjct 3655349 GCGCCGAAGTGGCGCCATTGGAAACCGTAGACGGGACCCAGATCCCCTTCTTCGCGGTGC 3655408 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGAT 30275 ||| ||| || || | ||| |||| || |||||| |||||||||| Sbjct 3655409 GTGAATCCCAGATTATCTAGAAACTCTCGAGACCCGTTGCCGTCCCAGAT 3655458 Score = 89.7 bits (98), Expect = 4e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858 ||| |||| || | ||| |||||||||||||| ||||| |||| |||||||| | || Sbjct 3654871 CTTGAGCGCGTCGATGTGGTCCAGGTAGACGTGCGCGTCGCCCATGGTGTGGATCAGTTC 3654930 Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918 || || | || || |||| || | ||||| ||| || || | ||| || || || Sbjct 3654931 GCCGGGGACGAGGTCGCACGCGTGGGCGAGCATGTGCGTCAGAAGGGCGTAACTTGCAAT 3654990 Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 29960 ||| || || || || || |||||||| | ||| | |||||| Sbjct 3654991 GTTGAACGGCACGCCCAGACCCATGTCGCACGATCGCTGGTA 3655032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616887856139