Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
>seq1
Length=4470873
Score = 100 bits (110), Expect = 2e-16
Identities = 196/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 29986 CTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045
|||||||| || ||| | |||||||||| || || |||||||| || |||
Sbjct 3655169 CTCACGTAGAATTGAGCAAACATGTGGCACGGCGGGAGGGCCATGAGTTTCAGGTCGGCC 3655228
Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105
||||||||||| | ||||||||| | ||| | |||||| || ||| | ||||
Sbjct 3655229 ACGTTCCAGGCGCTGAGGATGATGCGGCGGTCGTAAGGGTTGGTCTTGAGTTTGCGCACG 3655288
Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165
| | |||||| || ||| | ||| |||||| || || ||||
Sbjct 3655289 ATCTCGGCGATCTGATCGACACCCTTGTCCGTGTAGTCCGCGTGGCAATCTTTGTAAGGG 3655348
Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225
|| ||||| || | ||| ||||| ||||| || || ||||| || || ||||| | ||||
Sbjct 3655349 GCGCCGAAGTGGCGCCATTGGAAACCGTAGACGGGACCCAGATCCCCTTCTTCGCGGTGC 3655408
Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGAT 30275
||| ||| || || | ||| |||| || |||||| ||||||||||
Sbjct 3655409 GTGAATCCCAGATTATCTAGAAACTCTCGAGACCCGTTGCCGTCCCAGAT 3655458
Score = 89.7 bits (98), Expect = 4e-13
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
||| |||| || | ||| |||||||||||||| ||||| |||| |||||||| | ||
Sbjct 3654871 CTTGAGCGCGTCGATGTGGTCCAGGTAGACGTGCGCGTCGCCCATGGTGTGGATCAGTTC 3654930
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
|| || | || || |||| || | ||||| ||| || || | ||| || || ||
Sbjct 3654931 GCCGGGGACGAGGTCGCACGCGTGGGCGAGCATGTGCGTCAGAAGGGCGTAACTTGCAAT 3654990
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 29960
||| || || || || || |||||||| | ||| | ||||||
Sbjct 3654991 GTTGAACGGCACGCCCAGACCCATGTCGCACGATCGCTGGTA 3655032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616887856139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |