Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 >seq2 Length=4294494 Score = 122 bits (134), Expect = 2e-22 Identities = 702/1105 (64%), Gaps = 45/1105 (4%) Strand=Plus/Plus Query 221406 CGCAAGACTGC-GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464 ||||||| ||| |||| || |||||||||||||||||||||||| ||||||| || Sbjct 1336150 CGCAAGA-TGCTGTCAATGCGGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAG-CTG 1336207 Query 221465 T-TGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTG 221523 | |||| || ||||| ||| |||| ||| || | | || | ||||| || || || Sbjct 1336208 TCTGGCTTCTGGAGAGTCGAAAGGCAGACGTAGTGCCAGGAAAGCATCGGCAAGACCTTG 1336267 Query 221524 TACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGC---GGCCGCTTCTGGCACGGG 221580 || || | ||||| || | |||||| ||||| |||| | || ||||| Sbjct 1336268 GACACCAAGACCGACAGGTCGATGTCTCATGTTGCTGTTCTTGGCCTCAACT---ACGGG 1336324 Query 221581 ATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGT 221640 || ||||||| ||||| | ||||| ||||| |||||| |||| ||| Sbjct 1336325 GTAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACAACTTG---------GGT 1336375 Query 221641 CAGCTTCTGGTGATTG---AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGC 221697 | || ||| | | || | | ||||| | | ||| || ||||| | Sbjct 1336376 AACCTCATGGAGGCGGCCAAAGTCATATTCGCCACTCGCCTGG------TCGACAAAGGT 1336429 Query 221698 GTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTAT 221757 || || | | ||| || || || || |||||||| || || |||| | Sbjct 1336430 CGGCAGTGCCAGGGAGGCAAGATTGCAGACAGCCACCTCATCAGGCGAAGTGTACTCGAC 1336489 Query 221758 GATCTCTGTACAGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTG 221815 ||||| ||||| | ||| || ||| || || |||| || || || || ||| Sbjct 1336490 AATCTCCGTACACAAGTT--TGAGCTTCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTC 1336547 Query 221816 CGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGA 221875 ||| || |||||||| | || |||| ||||||||| ||||||| | || Sbjct 1336548 TCGTTGCATGCATCCTTGTACAAGATGTAGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGG 1336607 Query 221876 ATCTTGTCCCAGAGTTCTCTGG-CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-T 221933 || | ||| || | ||||| | | | || ||||| | | || || | Sbjct 1336608 ATAGCATACCACAGCT-TCTGGGCTTTGATGGT----TTGACGACCACGTCCTTCCCGCT 1336662 Query 221934 CATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACC 221993 | || |||||| || || |||||||| || | || | || || || | || Sbjct 1336663 CGTATTTCTCATAGAGAGCCTCGAATTTTTCACCATATACATCAGCAAGACCAGG-CGCC 1336721 Query 221994 TGGCG-GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCC 222052 | | | || || | ||| |||||| || ||| | | || | || |||||| || || Sbjct 1336722 TCGTGAGGGCAGAAGAGAGTCCAGTCCTGGTTCTTCTCAACACGCTTCATGAAAAGATCA 1336781 Query 222053 GGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTC 222112 || |||||||||| | || || || | | || || || ||||| ||| || Sbjct 1336782 GGAGTCCACAGCGCGTAGAAAAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTT 1336841 Query 222113 CTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCG 222172 |||| | |||||| ||||| | || || ||||| ||||| || |||| ||| | || Sbjct 1336842 CTCAAGTTCAAAAAGTCAAAGACATCTGCATGCCATGGCTCGAGGTAGATGGCGAAGGCA 1336901 Query 222173 CCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAG 222231 || || ||||||||||||||||| || | ||| ||| | |||||||| | || Sbjct 1336902 CCTGGACGCTTGTTGCCACCCTGGTCGA-CATAACGGGCAGTGTTGTTGAAGACTCTGAG 1336960 Query 222232 GGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCT 222291 | || | || || ||||| || |||||||| |||||| | || || | Sbjct 1336961 CATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCACG 1337020 Query 222292 CAGGTTACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCT 222350 | | | || ||| | || ||||| || ||| || |||||||| || ||| ||| Sbjct 1337021 AATG-CAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCT 1337079 Query 222351 TGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACG 222410 |||| ||||| ||| || || || ||||||||| | || | | || || || | Sbjct 1337080 TGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAG 1337139 Query 222411 ACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC 222470 ||| |||| | | | | || || |||||||| ||| |||||| |||||| | Sbjct 1337140 ACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACT 1337199 Query 222471 CCCTAGACATCAGATCGTACGTCTC 222495 | |||||| || | ||| ||||| Sbjct 1337200 TCTGAGACATGAGGTTGTAAGTCTC 1337224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843139689920