Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 4e-24
seq1 122 6e-22
seq3 86.0 4e-11
>seq2
Length=4294494
Score = 129 bits (142), Expect = 4e-24
Identities = 324/488 (66%), Gaps = 6/488 (1%)
Strand=Plus/Plus
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
||||| |||||||| || ||||| || |||| || || || | || | || || ||
Sbjct 1079187 GAAATCATTGCCAACGATCAAGGCAACCGAACCACCCCCTCGTTCGTCGCCTTCACCGAC 1079246
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
||||| | ||| || || |||||||| || | |||| || || ||| || ||
Sbjct 1079247 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTCAGAACACA 1079306
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
|||| ||||| || || ||||||| || || || | || | || || ||||
Sbjct 1079307 GTTTTCGATGCCAAGCGACTGATTGGCCGAAAGTTCGCGGACGCTGAGGTTCAGGCTGAC 1079366
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629
||| || | || || ||||| || | ||||| || ||| || || | |
Sbjct 1079367 ATGAAGCACTTCCCATTCAAGGTCATCGACAAGGGTGGAAAGCCAGTCATTGAGGTCGAG 1079426
Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689
| || | || || | || ||||| |||| ||| |||| || || ||||| | |||
Sbjct 1079427 TTCAAG--GGCGAGAACAAGCAATTCACACCAGAAGAAATCTCATCCATGGTCCTGACCA 1079484
Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748
| |||| | | || || ||| || |||||||| || | | ||||| || ||
Sbjct 1079485 AGATGAGAGAGACTGCCGAG-TCCTATCTTGGCGGCACTGTCAACAACGCAGTCATCACA 1079543
Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808
||||| ||||| || || || |||||||||||||| || || || || || |||||
Sbjct 1079544 GTTCCCGCATACTTCAACGACTCTCAACGTCAAGCTACCAAGGACGCTGGTCTCATTGCC 1079603
Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868
|| || ||||| | ||||| || || || || || ||||| || | || || |||||
Sbjct 1079604 GGCCTCAATGTGCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATCGCCTACGGTCTC 1079663
Query 474869 GATAAGAA 474876
|| |||||
Sbjct 1079664 GACAAGAA 1079671
>seq1
Length=4470873
Score = 122 bits (134), Expect = 6e-22
Identities = 149/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| |||||||| |||||||| || || |||||| | ||| || || ||| || |
Sbjct 3797843 ACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTC-GCTCAGGG 3797785
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | |||||||||||||||||| || || |||||||| || ||||||||||||||||
Sbjct 3797784 TGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTC 3797725
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729
|||||||||| || ||||| ||||| || || |||||| || | ||||
Sbjct 3797724 CTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAA 3797665
Query 480730 GGGTAATAGTTTTACCGGTGA 480750
| || || || || |||||||
Sbjct 3797664 GAGTGATGGTCTTTCCGGTGA 3797644
Score = 109 bits (120), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||||||||| ||||| ||||| || ||||| || || || || | |||||
Sbjct 3798070 CGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTG 3798011
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | |||||| | ||| || || ||||| || | ||||| || || |||||||| ||
Sbjct 3798010 CGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCC 3797951
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731
|||||||| |||||||| || ||| || || ||||||| | | || |||
Sbjct 3797950 TCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGG 3797891
Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || ||||| || ||||| |||||||||||
Sbjct 3797890 GTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTG 3797853
>seq3
Length=4123400
Score = 86.0 bits (94), Expect = 4e-11
Identities = 116/159 (73%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665
||||||| | ||| || ||||||||||| ||||| || | ||||| || ||||| ||
Sbjct 1163273 AGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGTTGCTGGTCAGGTGGG 1163214
Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724
||||||||||||||||| ||||| |||||| || || || || | | | |
Sbjct 1163213 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCA-C 1163155
Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763
|| ||||| || || || || ||||| ||||| |||||
Sbjct 1163154 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268173066036164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |