Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 3e-12
seq3 86.0 1e-11
>seq1
Length=4470873
Score = 87.8 bits (96), Expect = 3e-12
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||| || | | || || || || || | || | |||||| ||| ||
Sbjct 3798085 ATTTGCATACCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTG 3798026
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | || | ||| ||||||||||| || ||||| || || | || ||
Sbjct 3798025 TAGTCTGAAAGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGG 3797966
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || || || || ||| | |||| ||| || ||||| ||
Sbjct 3797965 TCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGAC 3797906
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| ||||| || || || || || || || || || || || || || ||||||||
Sbjct 3797905 GATTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || | ||| | ||| || || || || || ||||| || |||| |
Sbjct 3798487 ATGTTGTAGTCAGACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGC 3798428
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| ||||| || || || || || ||||| |||||| | || | || |||||
Sbjct 3798427 TGTTGGTCAGGTGGAATACCCTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTG 3798368
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || ||||||||||| || || || || || || || | || || || || || |||
Sbjct 3798367 TCCGACGACTCAACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGC 3798308
Query 193359 AT 193360
||
Sbjct 3798307 AT 3798306
>seq3
Length=4123400
Score = 86.0 bits (94), Expect = 1e-11
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| ||||||||||| || |||| || || ||||| || |||||||| ||
Sbjct 1163262 ATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTT 1163203
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||||| || |||| || | ||| || || ||||||||||| || || || || ||
Sbjct 1163202 GTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 1163143
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAA 193351
|| || || || || || || || ||
Sbjct 1163142 GGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652791867760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |