Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 114 2e-19 seq10 113 6e-19 seq1 111 2e-18 seq7 87.8 2e-11 >seq5 Length=3385568 Score = 114 bits (126), Expect = 2e-19 Identities = 226/324 (70%), Gaps = 19/324 (6%) Strand=Plus/Minus Query 1726725 CCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCT 1726784 ||| | | ||||||||||||||||||||||| | || | || || | ||||||| || Sbjct 1867129 CCAGGGTGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGAGAGGCCGGACGCCAGCT 1867070 Query 1726785 CGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGC-CACCAGGTCT 1726843 ||||||||| |||||||||||| ||||| || || |||||| || | || || |||||| Sbjct 1867069 CGCGGTGCAGCTGGCTCTCGGTGGTGCGGGCCCCGACGGCG-CCGATGCTCAGCAGGTCA 1867011 Query 1726844 GCCA--AATAAGGGGCCACCAGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGAC 1726899 |||| || ||| | || || | ||| | |||| ||| | |||| || | Sbjct 1867010 GCCAGGAACTGCGGG----CTGATGGTGTCGAGCATCTCGCTGGCGATGGGC--ATGCCC 1866957 Query 1726900 GGCGACGACGAGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCC---GTCGGCCAGGCG 1726956 ||| || | || || ||||| | || | | ||||||| || | |||| Sbjct 1866956 CGCGCCGTC-AGGTCCACGAACAGCTGCCGGCTCAGCCTCAGGCCCTTGTTGATCAGGAA 1866898 Query 1726957 GCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGG 1727016 || ||||||| || |||||| || |||||||||||| ||||| || |||||||| Sbjct 1866897 GC---TGCCGTCGATCTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACCGTGGTGCGCGG 1866841 Query 1727017 CTTTTCGACATAGGCGCGCATGAC 1727040 ||| |||| || | ||||| || Sbjct 1866840 CTTCTCGAGGTACGACCGCATCAC 1866817 >seq10 Length=1601177 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||| || ||||||||| || ||||||| ||||||| || | || |||||| Sbjct 545784 GCCGCAAACTATCTTGACATCAAGGCTTTGCTCGACGTTGGGTGTAAAACCGTTGCCAAC 545725 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || ||||| |||||||| ||||| || || ||| || ||| Sbjct 545724 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGAAAGACGTTCAATATCCAGAACG 545670 >seq1 Length=4470873 Score = 111 bits (122), Expect = 2e-18 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAG 1726753 |||||||||| ||||||||||| ||| ||| | ||||| ||||||||||||||| Sbjct 3388849 GCGGCGGCGCCCACGGCGTCGATGGCCACGCCCAGGGAGCCGTCCGTGCCGTTCTTGAAG 3388790 Query 1726754 CCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGC 1726813 ||||||| | || ||| |||| |||| |||||||||| |||| |||||| || || Sbjct 3388789 CCGATGGGGAACGACAGGCCCGAGGCCAGTTCGCGGTGCAGCTGGGACTCGGTGGTCCGG 3388730 Query 1726814 GCGCCCACGGCGCC 1726827 ||||| | |||||| Sbjct 3388729 GCGCCAATGGCGCC 3388716 >seq7 Length=2329771 Score = 87.8 bits (96), Expect = 2e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||||||||| || ||||||||||| |||||| ||||||||| |||| | Sbjct 253995 AGTAGACGGTCGGCGACGAATTCGATGTACTGTTGCATGAGCTTGGCGTTCATTCCGAGG 254054 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || ||||| ||||| | || ||| || || |||||||| ||||||||| |||| Sbjct 254055 AGGGCCACTGGCAGAGCATCCGTCAAGAATTCCTTCTCGATGGTGACGGCCTCAGTGATG 254114 Query 868931 A 868931 | Sbjct 254115 A 254115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107127464750331