Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 2e-19
seq10 113 6e-19
seq1 111 2e-18
seq7 87.8 2e-11
>seq5
Length=3385568
Score = 114 bits (126), Expect = 2e-19
Identities = 226/324 (70%), Gaps = 19/324 (6%)
Strand=Plus/Minus
Query 1726725 CCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCT 1726784
||| | | ||||||||||||||||||||||| | || | || || | ||||||| ||
Sbjct 1867129 CCAGGGTGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGAGAGGCCGGACGCCAGCT 1867070
Query 1726785 CGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGC-CACCAGGTCT 1726843
||||||||| |||||||||||| ||||| || || |||||| || | || || ||||||
Sbjct 1867069 CGCGGTGCAGCTGGCTCTCGGTGGTGCGGGCCCCGACGGCG-CCGATGCTCAGCAGGTCA 1867011
Query 1726844 GCCA--AATAAGGGGCCACCAGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGAC 1726899
|||| || ||| | || || | ||| | |||| ||| | |||| || |
Sbjct 1867010 GCCAGGAACTGCGGG----CTGATGGTGTCGAGCATCTCGCTGGCGATGGGC--ATGCCC 1866957
Query 1726900 GGCGACGACGAGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCC---GTCGGCCAGGCG 1726956
||| || | || || ||||| | || | | ||||||| || | ||||
Sbjct 1866956 CGCGCCGTC-AGGTCCACGAACAGCTGCCGGCTCAGCCTCAGGCCCTTGTTGATCAGGAA 1866898
Query 1726957 GCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGG 1727016
|| ||||||| || |||||| || |||||||||||| ||||| || ||||||||
Sbjct 1866897 GC---TGCCGTCGATCTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACCGTGGTGCGCGG 1866841
Query 1727017 CTTTTCGACATAGGCGCGCATGAC 1727040
||| |||| || | ||||| ||
Sbjct 1866840 CTTCTCGAGGTACGACCGCATCAC 1866817
>seq10
Length=1601177
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||| ||||| || ||||||||| || ||||||| ||||||| || | || ||||||
Sbjct 545784 GCCGCAAACTATCTTGACATCAAGGCTTTGCTCGACGTTGGGTGTAAAACCGTTGCCAAC 545725
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
|||||||||||||| || ||||| |||||||| ||||| || || ||| || |||
Sbjct 545724 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGAAAGACGTTCAATATCCAGAACG 545670
>seq1
Length=4470873
Score = 111 bits (122), Expect = 2e-18
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAG 1726753
|||||||||| ||||||||||| ||| ||| | ||||| |||||||||||||||
Sbjct 3388849 GCGGCGGCGCCCACGGCGTCGATGGCCACGCCCAGGGAGCCGTCCGTGCCGTTCTTGAAG 3388790
Query 1726754 CCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGC 1726813
||||||| | || ||| |||| |||| |||||||||| |||| |||||| || ||
Sbjct 3388789 CCGATGGGGAACGACAGGCCCGAGGCCAGTTCGCGGTGCAGCTGGGACTCGGTGGTCCGG 3388730
Query 1726814 GCGCCCACGGCGCC 1726827
||||| | ||||||
Sbjct 3388729 GCGCCAATGGCGCC 3388716
>seq7
Length=2329771
Score = 87.8 bits (96), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||||||||| || ||||||||||| |||||| ||||||||| |||| |
Sbjct 253995 AGTAGACGGTCGGCGACGAATTCGATGTACTGTTGCATGAGCTTGGCGTTCATTCCGAGG 254054
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| ||||| ||||| | || ||| || || |||||||| ||||||||| ||||
Sbjct 254055 AGGGCCACTGGCAGAGCATCCGTCAAGAATTCCTTCTCGATGGTGACGGCCTCAGTGATG 254114
Query 868931 A 868931
|
Sbjct 254115 A 254115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107127464750331
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |