Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 4e-20
seq3 91.5 1e-13
>seq1
Length=4470873
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || || |||||||| || || ||||| ||| || |
Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || || ||||||||||| || || || || |||||
Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| |||||||| || || || || || || || ||| | |||||||| |||
Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| || || || | || || |||| || || ||
Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || || ||||| || ||||| || | |
Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||| || || || || || || ||
Sbjct 3798366 GACACTATCGACAACGTCAAGAGCAAA-ATCCAAGACAAGGAGGGTATTCCACCTGACCA 3798424
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| || ||||||||||| || || ||| |||||||| | | |||| || || ||
Sbjct 3798425 ACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACAA 3798484
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| ||||||||| || || |||||||||
Sbjct 3798485 CATCCAAAAGGAAAGCACTCTGCACTTGGTG 3798515
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || ||||| || || || || ||||| || ||| | |
Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | ||||| ||||| || ||||| || || || |||||||| ||
Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||||||||| || ||||| | || ||| | | | ||||| || |||
Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || || || || || ||| | || | || | ||||| ||
Sbjct 3798030 ATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTTCGCGGCGG 3798076
>seq3
Length=4123400
Score = 91.5 bits (100), Expect = 1e-13
Identities = 127/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || || || ||||| || || | ||||||| | || |
Sbjct 1163122 AAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAAT 1163181
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||||||||| |||||||| || || || || ||||| |||||||||
Sbjct 1163182 GTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTGATCTTT 1163241
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896
||||| || || || |||||| ||| | || || ||||||||||||| ||
Sbjct 1163242 GCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAAGGTAT 1163299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896795808040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |