Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq3 91.5 1e-13 >seq1 Length=4470873 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || |||||||| || || ||||| ||| || | Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||||||||||| || || || || ||||| Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| || || || || || || || ||| | |||||||| ||| Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || || | || || |||| || || || Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || ||||| || ||||| || | | Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| || || || || || || || Sbjct 3798366 GACACTATCGACAACGTCAAGAGCAAA-ATCCAAGACAAGGAGGGTATTCCACCTGACCA 3798424 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || ||| |||||||| | | |||| || || || Sbjct 3798425 ACAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACAA 3798484 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| ||||||||| || || ||||||||| Sbjct 3798485 CATCCAAAAGGAAAGCACTCTGCACTTGGTG 3798515 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || ||||| || || || || ||||| || ||| | | Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| ||||| || ||||| || || || |||||||| || Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || ||||| | || ||| | | | ||||| || ||| Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || ||| | || | || | ||||| || Sbjct 3798030 ATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTTCGCGGCGG 3798076 >seq3 Length=4123400 Score = 91.5 bits (100), Expect = 1e-13 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || || || ||||| || || | ||||||| | || | Sbjct 1163122 AAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAAT 1163181 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| |||||||| || || || || ||||| ||||||||| Sbjct 1163182 GTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTGATCTTT 1163241 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 ||||| || || || |||||| ||| | || || ||||||||||||| || Sbjct 1163242 GCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAAGGTAT 1163299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896795808040