Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 4e-16
seq5 100 5e-15
seq2 96.9 5e-14
seq10 95.1 2e-13
seq4 95.1 2e-13
seq7 93.3 7e-13
seq3 86.0 1e-10
>seq1
Length=4470873
Score = 104 bits (114), Expect = 4e-16
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 2175038 CGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCACGCTGCCGTCGGTGCCGTTTTTAAA 2175097
|||||||| || |||||| |||| ||| ||| | |||||| |||||||| || ||
Sbjct 3388850 CGCGGCGGCGCCCACGGCGTCGATGGCCACGCCCAGGGAGCCGTCCGTGCCGTTCTTGAA 3388791
Query 2175098 CCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGCTCTCGGTGGTGCG 2175157
|||| || |||| ||| |||| |||| ||||||||||| |||| ||||||||| ||
Sbjct 3388790 GCCGATGGGGAACGACAGGCCCGAGGCCAGTTCGCGGTGCAGCTGGGACTCGGTGGTCCG 3388731
Query 2175158 CGCGCCCACGGCGCC 2175172
||||| | ||||||
Sbjct 3388730 GGCGCCAATGGCGCC 3388716
>seq5
Length=3385568
Score = 100 bits (110), Expect = 5e-15
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 2175070 CCACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTT 2175129
||| | |||||||||||||||| || || || || || |||| || | ||||||| |
Sbjct 1867129 CCAGGGTGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGAGAGGCCGGACGCCAGCT 1867070
Query 2175130 CGCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172
||||||||| |||||||||||||||||| || || ||||||||
Sbjct 1867069 CGCGGTGCAGCTGGCTCTCGGTGGTGCGGGCCCCGACGGCGCC 1867027
>seq2
Length=4294494
Score = 96.9 bits (106), Expect = 5e-14
Identities = 176/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||||||||| || || |||| ||| ||||| | |||||| || | || || |||||
Sbjct 1336922 CTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGA 1336981
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|| |||||||| || | ||| | ||| | || || | ||| || | ||
Sbjct 1336982 GGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACC 1337041
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | || || | || || || || ||||| || ||
Sbjct 1337042 AATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTC 1337101
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | | ||||| || || ||| || | | ||| ||
Sbjct 1337102 AATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCC 1337161
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|||||||| ||||| ||
Sbjct 1337162 AGCATTGAACAGCGTAGG 1337179
>seq10
Length=1601177
Score = 95.1 bits (104), Expect = 2e-13
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||||| ||||| || ||||||||| | | ||||| | ||||| || ||||| ||||||
Sbjct 545784 GCCGCAAACTATCTTGACATCAAGGCTTTGCTCGACGTTGGGTGTAAAACCGTTGCCAAC 545725
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||| || ||||| || ||||| ||||| || || ||| || |||
Sbjct 545724 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGAAAGACGTTCAATATCCAGAACG 545670
>seq4
Length=3720747
Score = 95.1 bits (104), Expect = 2e-13
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| || || |||||||||||| |||| ||||| || |||
Sbjct 1052514 GTACTTGGTGACGGCCTTGGTGCCTTCCGAGACGGCGTGCTTGGCGAGTTCACCAGGCAG 1052455
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| || | || | |||||||||||| ||||
Sbjct 1052454 GATGAGTCTGACAGAGGTCTGGATCTCTCGGG 1052423
>seq7
Length=2329771
Score = 93.3 bits (102), Expect = 7e-13
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078
|| || ||||||||||||||||| |||||||| |||||| ||||||||| |||| |
Sbjct 253995 AGTAGACGGTCGGCGACGAATTCGATGTACTGTTGCATGAGCTTGGCGTTCATTCCGAGG 254054
Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138
|| ||||| ||||| | || | | || || |||||||| ||||||||| |||||
Sbjct 254055 AGGGCCACTGGCAGAGCATCCGTCAAGAATTCCTTCTCGATGGTGACGGCCTCAGTGATG 254114
Query 794139 A 794139
|
Sbjct 254115 A 254115
>seq3
Length=4123400
Score = 86.0 bits (94), Expect = 1e-10
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 2411509 GCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 2411568
||||||||||||||||||||| || |||||||| || ||||| | || || | |||
Sbjct 1917413 GCAAAGATCTTGCGCTGGTCGACTCCACCAAACTGAGCATCGACTTTCAGATGTTCTTCG 1917354
Query 2411569 TCGAGGGCCTGCATGAGCGGGTAGA 2411593
||||| ||||||||||| |||||||
Sbjct 1917353 TCGAGTGCCTGCATGAGAGGGTAGA 1917329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916231188437777
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |