Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 104 4e-16 seq5 100 5e-15 seq2 96.9 5e-14 seq10 95.1 2e-13 seq4 95.1 2e-13 seq7 93.3 7e-13 seq3 86.0 1e-10 >seq1 Length=4470873 Score = 104 bits (114), Expect = 4e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 2175038 CGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCACGCTGCCGTCGGTGCCGTTTTTAAA 2175097 |||||||| || |||||| |||| ||| ||| | |||||| |||||||| || || Sbjct 3388850 CGCGGCGGCGCCCACGGCGTCGATGGCCACGCCCAGGGAGCCGTCCGTGCCGTTCTTGAA 3388791 Query 2175098 CCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGCTCTCGGTGGTGCG 2175157 |||| || |||| ||| |||| |||| ||||||||||| |||| ||||||||| || Sbjct 3388790 GCCGATGGGGAACGACAGGCCCGAGGCCAGTTCGCGGTGCAGCTGGGACTCGGTGGTCCG 3388731 Query 2175158 CGCGCCCACGGCGCC 2175172 ||||| | |||||| Sbjct 3388730 GGCGCCAATGGCGCC 3388716 >seq5 Length=3385568 Score = 100 bits (110), Expect = 5e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 2175070 CCACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTT 2175129 ||| | |||||||||||||||| || || || || || |||| || | ||||||| | Sbjct 1867129 CCAGGGTGCCGTCGGTGCCGTTCTTGAAGCCCACGGGGAACGAGAGGCCGGACGCCAGCT 1867070 Query 2175130 CGCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 ||||||||| |||||||||||||||||| || || |||||||| Sbjct 1867069 CGCGGTGCAGCTGGCTCTCGGTGGTGCGGGCCCCGACGGCGCC 1867027 >seq2 Length=4294494 Score = 96.9 bits (106), Expect = 5e-14 Identities = 176/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||||||||| || || |||| ||| ||||| | |||||| || | || || ||||| Sbjct 1336922 CTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGA 1336981 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 || |||||||| || | ||| | ||| | || || | ||| || | || Sbjct 1336982 GGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACC 1337041 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || || | || || || || ||||| || || Sbjct 1337042 AATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTC 1337101 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | | ||||| || || ||| || | | ||| || Sbjct 1337102 AATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCC 1337161 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||| ||||| || Sbjct 1337162 AGCATTGAACAGCGTAGG 1337179 >seq10 Length=1601177 Score = 95.1 bits (104), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| ||||| || ||||||||| | | ||||| | ||||| || ||||| |||||| Sbjct 545784 GCCGCAAACTATCTTGACATCAAGGCTTTGCTCGACGTTGGGTGTAAAACCGTTGCCAAC 545725 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || ||||| || ||||| ||||| || || ||| || ||| Sbjct 545724 ATGATCAAGGGCAAATCCCCCGAAGAGATCCGAAAGACGTTCAATATCCAGAACG 545670 >seq4 Length=3720747 Score = 95.1 bits (104), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| || || |||||||||||| |||| ||||| || ||| Sbjct 1052514 GTACTTGGTGACGGCCTTGGTGCCTTCCGAGACGGCGTGCTTGGCGAGTTCACCAGGCAG 1052455 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || | || | |||||||||||| |||| Sbjct 1052454 GATGAGTCTGACAGAGGTCTGGATCTCTCGGG 1052423 >seq7 Length=2329771 Score = 93.3 bits (102), Expect = 7e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 794019 AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATG 794078 || || ||||||||||||||||| |||||||| |||||| ||||||||| |||| | Sbjct 253995 AGTAGACGGTCGGCGACGAATTCGATGTACTGTTGCATGAGCTTGGCGTTCATTCCGAGG 254054 Query 794079 AGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATG 794138 || ||||| ||||| | || | | || || |||||||| ||||||||| ||||| Sbjct 254055 AGGGCCACTGGCAGAGCATCCGTCAAGAATTCCTTCTCGATGGTGACGGCCTCAGTGATG 254114 Query 794139 A 794139 | Sbjct 254115 A 254115 >seq3 Length=4123400 Score = 86.0 bits (94), Expect = 1e-10 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 2411509 GCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 2411568 ||||||||||||||||||||| || |||||||| || ||||| | || || | ||| Sbjct 1917413 GCAAAGATCTTGCGCTGGTCGACTCCACCAAACTGAGCATCGACTTTCAGATGTTCTTCG 1917354 Query 2411569 TCGAGGGCCTGCATGAGCGGGTAGA 2411593 ||||| ||||||||||| ||||||| Sbjct 1917353 TCGAGTGCCTGCATGAGAGGGTAGA 1917329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231188437777