Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 2e-17
seq1 104 2e-17
seq3 95.1 8e-15
>seq4
Length=3720747
Score = 104 bits (114), Expect = 2e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| || || | ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 362426 CAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 362485
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || |||||||||||||||||||| ||||||||||| |||| | || ||||||||
Sbjct 362486 CTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGTC 362545
>seq1
Length=4470873
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||| ||||||||||| ||||| || || |||| ||||
Sbjct 3798061 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCT 3798002
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| | ||| || || || ||||||| ||||||||||| | || | |||||||||||
Sbjct 3798001 TCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 3797942
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| | || || || | ||| ||
Sbjct 3797941 TGAATCTTGCTCTTTAC--AT--TGTCGATGGTATCAGACGATTCAACCTCGAGGGTGAT 3797886
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || |||||||| || || || |||||
Sbjct 3797885 GGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || |||| ||| | ||||| ||||| || ||||| ||||| || || | || ||
Sbjct 3798520 CTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCA 3798461
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| ||||| || || ||||||| ||| || ||||| | || | |||||||||
Sbjct 3798460 TCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTG 3798401
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | ||||| |||||| | || | || | ||| || |||| ||| ||
Sbjct 3798400 TCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATT 3798341
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || | ||||| || |||||||||||
Sbjct 3798340 GTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 86.0 bits (94), Expect = 4e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| || || || || || ||||| ||| |||| ||||
Sbjct 3797833 AGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCT 3797774
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||| |||||||| || || ||||| || | || | || ||||||||
Sbjct 3797773 TCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCC 3797714
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| ||| ||| ||||| |||| || ||||||
Sbjct 3797713 TGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTC 3797654
Query 34946 TTTCCCGTGA 34955
||||| ||||
Sbjct 3797653 TTTCCGGTGA 3797644
>seq3
Length=4123400
Score = 95.1 bits (104), Expect = 8e-15
Identities = 134/186 (72%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| |||||||| ||||| || | || |||| || |||||||||||||| ||||
Sbjct 1163296 CCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGA 1163237
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| |||||||||||| | || | || |||||||| | || || ||||| ||
Sbjct 1163236 TCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGAC--AT- 1163180
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || | ||| || || | ||| |||||||| ||||||||||||||
Sbjct 1163179 -TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 1163121
Query 34964 ACAAAG 34969
|| |||
Sbjct 1163120 ACGAAG 1163115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692232378517
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |