Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 149 5e-31 >seq1 Length=4470873 Score = 149 bits (164), Expect = 5e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 ||| || | |||||| |||||||| || || ||||| ||||| | | || ||| || Sbjct 3798290 CAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCGTC 3798231 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||| || | ||||||| |||||||||||| || |||||||||||||| Sbjct 3798230 TTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTGTC 3798171 Query 29694 TTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||| | || ||| | || | |||||||| ||| ||||| || || |||| Sbjct 3798170 TTG-AATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGATAG 3798112 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| || | ||| || ||||| || ||||| Sbjct 3798111 TTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 |||||||| || || ||| ||| ||||| ||||| || || | | || || ||| Sbjct 3798517 AGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCC 3798458 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || ||||| ||| | ||||||| || || || || ||||||||||| |||||| Sbjct 3798457 TCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCT 3798398 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||||| | || | |||||| || || |||||||| || || || Sbjct 3798397 TGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTC 3798338 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || |||||||| Sbjct 3798337 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218528635163