Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 5e-31
>seq1
Length=4470873
Score = 149 bits (164), Expect = 5e-31
Identities = 163/214 (76%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| || | |||||| |||||||| || || ||||| ||||| | | || ||| ||
Sbjct 3798290 CAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCGTC 3798231
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||| || | ||||||| |||||||||||| || ||||||||||||||
Sbjct 3798230 TTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTGTC 3798171
Query 29694 TTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752
||| |||||| | || ||| | || | |||||||| ||| ||||| || || ||||
Sbjct 3798170 TTG-AATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGATAG 3798112
Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| || | ||| || ||||| || |||||
Sbjct 3798111 TTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|||||||| || || ||| ||| ||||| ||||| || || | | || || |||
Sbjct 3798517 AGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCC 3798458
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | || ||||| ||| | ||||||| || || || || ||||||||||| ||||||
Sbjct 3798457 TCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCT 3798398
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| ||||| | || | |||||| || || |||||||| || || ||
Sbjct 3798397 TGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTC 3798338
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || ||||||||
Sbjct 3798337 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218528635163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |