Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 4e-31
seq3 87.8 4e-12
>seq1
Length=4470873
Score = 150 bits (166), Expect = 4e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| || | ||| || | || ||||| ||||| ||||| || || ||||| |
Sbjct 3798306 TACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTG 3798247
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||| ||||||||||||||| || || || ||||| | || ||| ||||| || |
Sbjct 3798246 AGAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGG 3798187
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || || || |||||||| |||||| || ||||| ||||| || ||| | |||
Sbjct 3798186 GGATACCCTCTTTGTCTTGAAT-TTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCG 3798128
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||| || || || ||||| || | ||||| ||||| || |||||
Sbjct 3798127 ACTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 104 bits (114), Expect = 5e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | || || || |||||||| || ||||| || ||
Sbjct 3797850 TACCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGC 3797791
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | || ||||| ||||| ||||| || ||||| || | || ||||| ||||
Sbjct 3797790 TCAGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAG 3797731
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| ||||||||||| || || ||||| | || || || || ||||||||| | | ||| |
Sbjct 3797730 GAATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGA 3797671
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786
| || | ||| || ||||| || ||
Sbjct 3797670 CCTCAAGAGTGATGGTCTTTCCGGT 3797646
Score = 93.3 bits (102), Expect = 8e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||||||||| ||| || || || || || ||||| || | | || ||
Sbjct 3798517 AGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCC 3798458
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| | || || || |||||||| | || ||||| || || || || || ||||| |||
Sbjct 3798457 TCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCT 3798398
Query 82719 TGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|| || |||||| || || || || || || || | || ||||| | || || ||
Sbjct 3798397 TGGAT-TTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGT 3798339
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || ||||| ||||| || || ||||||||
Sbjct 3798338 CTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
>seq3
Length=4123400
Score = 87.8 bits (96), Expect = 4e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| ||| || || || ||||| ||||| |||||||| | || ||| || || || ||
Sbjct 1163273 AGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGTTGCTGGTCAGGTGGG 1163214
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||||||||| ||||| ||||| | || ||||| || || || || || || ||
Sbjct 1163213 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 1163154
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|| | || || |||||||| || | ||||| || ||
Sbjct 1163153 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981825401108477
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |