Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 174 2e-38 seq3 93.3 4e-14 seq1 91.5 1e-13 seq4 86.0 6e-12 >seq2 Length=4294494 Score = 174 bits (192), Expect = 2e-38 Identities = 1097/1738 (63%), Gaps = 37/1738 (2%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT-CAATGAGTCGCTTTATCTTCATCT 148119 ||| || ||||| || |||||||| || ||||| | ||| | | | || || | Sbjct 1335671 CTGATCGATGAAGGCACCACGGTCGGCAGCCATCTGCAAAACATTACGCTGGCTG-ATTT 1335729 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | ||||||||||| ||| |||| ||| || ||| | ||| ||| | | Sbjct 1335730 CCCAGACAGTCTTGTACAGAGCCTTCATATCATCAGGGATGTTGGGAATGTTCTGAATTG 1335789 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 |||| | | |||| || | || ||| | ||| | | ||| || |||| || Sbjct 1335790 AGCCACCATCGGCAATGATACGGTTCTTCATATTGTCAGACCAGAGGCCAAGGTCGACCA 1335849 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGAT 148299 ||| | | ||| | | || || || || || || || || | || || || || Sbjct 1335850 AGTCCTTCAACAGCCATGGGTTGACGACTTGGAATTCACCAGCCAATACACGTCGAGAAT 1335909 Query 148300 ACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTG 148359 | | |||| || | || ||||| | |||||||| ||||| ||||| | |||| || Sbjct 1335910 AGATGTTGGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGATCTGGGAAGTCGATG 1335969 Query 148360 CCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTT-TGCGC 148418 | || ||||| || || || || |||||||| | |||| | || |||| ||| Sbjct 1335970 CAGTAGGCATAGGAGCGACAAGAAGGGAGTTGCGGATACCGTGCTTAGCAATTTCTGCT- 1336028 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 ||||| | ||||||||||||| || || || || ||||||||||| || || || Sbjct 1336029 TTCAGGCCATCCCAGTCCCAGAGGTCAGAAGGAGTGACATTCCACATGTCATATTGAAGG 1336088 Query 148479 ATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||||| | | || | ||||||||||| || | || | || || || || || Sbjct 1336089 ATGCC-CTGTGAGACTGGGCTGCCCTCATAGGTTTCATAAGTGCCTTGTTCCTTGGCGAG 1336147 Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597 ||||| || | ||| ||| ||| || ||||| || || |||||||| | Sbjct 1336148 CTCGCAAGATGCTGTCAATGCGGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTG 1336207 Query 148598 CGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | | | || | ||| | |||| ||| || || || || |||||||| || | Sbjct 1336208 T-CTGGCTTCTGGAGAGTCGAAAGGCAGACGTAGTGCCAGGAAAGCATCGGCAAGACCTT 1336266 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT-CGAGCGGA 148715 | || || | || | || || ||| | |||||| | || ||| | | || Sbjct 1336267 GGACACCAAGACCGACAGGTCGATGTCTCATGTTGCTGTTCTTGGC-CTCAACTACGGGG 1336325 Query 148716 TAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAAT-TC-TGC 148773 |||| |||| ||||||||||||| || || || || || | |||| || || Sbjct 1336326 TAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACAACTTGGGTAACCTCATGG 1336385 Query 148774 --GCAGC--AATTCAAAATCGT-ACTTGTCA--TCTACGATGCATCGGTTCACGGCGATA 148826 || || || ||| | ||| ||| | | || || | | |||| || || | Sbjct 1336386 AGGCGGCCAAAGTCATATTCGCCACTCGCCTGGTCGACAAAGG-TCGG--CAGTGCCAGG 1336442 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 ||||| |||||||| || ||| |||||| || | ||||||| || ||||| | ||| Sbjct 1336443 GAGGCAAGATTGCAGACAGCCACCTCATCAGGCGAAGTGTACTCGACAATCTCCGTACAC 1336502 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 | || || | || ||||| |||||| || |||||||| |||||| || ||| Sbjct 1336503 AAGTTTGAGCTTCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCC 1336562 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATG-CAG 149005 ||||||| ||||| ||| |||||| || ||| | || | || | | | ||| Sbjct 1336563 TTGTACAAGATGTAGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGGAT-AGCATACCACAG 1336621 Query 149006 GTCCTGCGCGCGCACTTGCTGCTCGTAG-----CGACCCTCCTGCTCGTATAAAGTATAC 149060 | ||| || ||| || | | || || ||| |||||||| ||| Sbjct 1336622 CTTCTGGGCT-----TTGATGGTTTGACGACCACGTCCTTCCCGCTCGTATTTCTCATAG 1336676 Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATG 149120 || |||||| || || || ||| | ||||| || || ||| ||||| | | Sbjct 1336677 AGAGCCTCGAATTTTTCACCATATACATCAGCAAGACCAGGCGCCTCGTGAGGGCAGAAG 1336736 Query 149121 AGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCG 149180 || | ||| | || | | || |||||||| || ||||| || ||| |||||| Sbjct 1336737 AGAGTCCAGTCCTGGTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCG 1336796 Query 149181 TACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACG 149240 || | ||||| || || | ||||| ||| ||| | || ||| | | | Sbjct 1336797 TAGAAAAGGTCACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAG 1336856 Query 149241 CTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG--- 149297 || | || || ||||| ||||| | ||| | |||| || || |||||| Sbjct 1336857 TCAAAGACATCTGCATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTG 1336916 Query 149298 CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCA 149357 || ||||||||||| | || | ||||||| || |||| | ||| || | ||| Sbjct 1336917 CCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCA 1336976 Query 149358 CTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTG 149417 ||| || || || || | |||| ||| || || | ||| | ||| Sbjct 1336977 TTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTG 1337036 Query 149418 ACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATG 149477 | || || ||||| || ||| ||||| || ||| ||| || ||||| Sbjct 1337037 AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATA 1337096 Query 149478 CCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGC 149537 || || |||||||| ||||||| | | ||||| || ||| ||| || | || Sbjct 1337097 CCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGC 1337156 Query 149538 GTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCG 149597 || || || ||||| || || |||||| ||||| | ||||| ||| | | | Sbjct 1337157 GTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTG 1337216 Query 149598 TACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGC 149657 || | ||||| | || | |||||||||||| || || | | || ||||||||| Sbjct 1337217 TAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGC 1337276 Query 149658 ATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGT 149717 || || || ||||| || || |||| || || || |||||||| || ||| | Sbjct 1337277 ATGTGTTGTGGTCGTTCAGCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAAC 1337336 Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 |||||| |||||||||| | ||||| ||||| ||| | | ||||||| | || || Sbjct 1337337 GTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGA 1337394 >seq3 Length=4123400 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||| ||||| || || | || | || |||||||| || ||||| ||||||||| Sbjct 1163261 TCCTCGAGTTGCTTTCCGGCAAAGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTG 1163202 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| |||| ||||| | Sbjct 1163201 TCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATG 1163142 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || || ||||| Sbjct 1163141 GTCTTGCCCGTGAGGGTCTTGACGAA 1163116 >seq1 Length=4470873 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| || | ||| | | | || || | || |||| Sbjct 3798047 GGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCA-TCTTCTAATTGTTTGC 3797989 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || |||||||||||||| ||||| |||||||| ||||| || Sbjct 3797988 CTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCT 3797929 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || || | | || || |||| ||||| ||| ||||||||||| | Sbjct 3797928 TTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 3797869 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||| ||||| Sbjct 3797868 TCTTGACGAAAATTTGCAT 3797850 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || ||||| || |||||||| |||| || ||| | | | || || || | Sbjct 3797825 ATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCA-TCTTCAAGTT 3797767 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || || |||||||| || ||||| || ||||||||||| ||||| Sbjct 3797766 GCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCT 3797707 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||| || ||| || || || | |||| ||| || |||| Sbjct 3797706 TGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTCTTTCCGG 3797647 Query 133636 T 133636 | Sbjct 3797646 T 3797646 >seq4 Length=3720747 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || ||||| ||| | ||| |||||||||||| Sbjct 362435 ATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 362494 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 ||| || ||| | || || || ||||||||||| ||||| ||||||||||| ||| Sbjct 362495 CTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGTCTGTG 362549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419935885320