Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 113 1e-19 >seq2 Length=4294494 Score = 113 bits (124), Expect = 1e-19 Identities = 417/640 (65%), Gaps = 15/640 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 || ||| || ||||||| || || || || ||||| | |||||| |||| || Sbjct 1337192 TACTCACGCCTCTCCTACGCTGTTCAATGCTGGAACGCCTCAGCCTCAATTGTCTTCATG 1337133 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||| | | | || || || || ||||||||||| ||||| | || || Sbjct 1337132 CTTCTTAATTGACATGAAGGAGGACAGCATTGAAGGTATCTATGACACACTCAAGACCTG 1337073 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644 |||| | || || || | | |||| || |||||| | | | ||| ||||| | | Sbjct 1337072 TGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCAATGCTCACTGCATTCGTGCTAC 1337013 Query 110645 AGGAGCAAATATCGCAA-CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703 || || | || || || | | ||| || ||| ||| || | |||||| | |||| Sbjct 1337012 TGGCTCATACATTGCCGGCACCAATGGGACCTCCAA-TGGTCTCATCCCAATGCTCAGAG 1336954 Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTG 110760 |||||||| ||||||| ||||| | || ||||| ||| | || | || | Sbjct 1336953 TCTTCAACAACACTGCCCGTTATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTCG 1336894 Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT-CGTAAAAAT 110819 | ||||| ||||| || |||||| ||||| | ||||| || || |||||| | || || Sbjct 1336893 CCATCTACCTCGAGCCATGGCATGCAGATGTCTTTGACTT-TTTGAACTTGAGAAAGAAC 1336835 Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879 || || |||||| | || ||||| | || || || |||||| | | ||| | Sbjct 1336834 CACGGCAAAGAAGAAGTCCGTGCTCGTGACCTTTTCTACGCGCTGTGGACTCCTGATCTT 1336775 Query 110880 TTCATGAAACGTGTT--CAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937 |||||||| |||||| ||||| || ||| |||| | || ||||| | | Sbjct 1336774 TTCATGAAGCGTGTTGAGAAGAACCAGG--ACTGGACTCTCTTCTGCCCTCACGAGGCGC 1336717 Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997 ||||||| ||||||||||||| || | || || | || || || ||||| || | Sbjct 1336716 CTGGTCTTGCTGATGTATATGGTGAAAAATTCGAGGCTCTCTATGAGAAATACGAGCGGG 1336657 Query 110998 AAGGCAAGT-TTCG-CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055 |||| | || ||| ||||| || ||| || | || |||| |||||||| | Sbjct 1336656 AAGG-ACGTGGTCGTCAAAC-CATCAAAGCCCAGAAGCTGTGGTATGCTATCCTTGAGGC 1336599 Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095 || ||| ||||| || || || || ||||| || ||| Sbjct 1336598 TCAGACTGAGACTGGCACACCCTACATCTTGTACAAGGAT 1336559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186810625536423