Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 1e-19
>seq2
Length=4294494
Score = 113 bits (124), Expect = 1e-19
Identities = 417/640 (65%), Gaps = 15/640 (2%)
Strand=Plus/Minus
Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524
|| ||| || ||||||| || || || || ||||| | |||||| |||| ||
Sbjct 1337192 TACTCACGCCTCTCCTACGCTGTTCAATGCTGGAACGCCTCAGCCTCAATTGTCTTCATG 1337133
Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584
||| | | | || || || || ||||||||||| ||||| | || ||
Sbjct 1337132 CTTCTTAATTGACATGAAGGAGGACAGCATTGAAGGTATCTATGACACACTCAAGACCTG 1337073
Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644
|||| | || || || | | |||| || |||||| | | | ||| ||||| | |
Sbjct 1337072 TGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCAATGCTCACTGCATTCGTGCTAC 1337013
Query 110645 AGGAGCAAATATCGCAA-CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAG 110703
|| || | || || || | | ||| || ||| ||| || | |||||| | ||||
Sbjct 1337012 TGGCTCATACATTGCCGGCACCAATGGGACCTCCAA-TGGTCTCATCCCAATGCTCAGAG 1336954
Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTG 110760
|||||||| ||||||| ||||| | || ||||| ||| | || | || |
Sbjct 1336953 TCTTCAACAACACTGCCCGTTATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTCG 1336894
Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT-CGTAAAAAT 110819
| ||||| ||||| || |||||| ||||| | ||||| || || |||||| | || ||
Sbjct 1336893 CCATCTACCTCGAGCCATGGCATGCAGATGTCTTTGACTT-TTTGAACTTGAGAAAGAAC 1336835
Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879
|| || |||||| | || ||||| | || || || |||||| | | ||| |
Sbjct 1336834 CACGGCAAAGAAGAAGTCCGTGCTCGTGACCTTTTCTACGCGCTGTGGACTCCTGATCTT 1336775
Query 110880 TTCATGAAACGTGTT--CAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTC 110937
|||||||| |||||| ||||| || ||| |||| | || ||||| | |
Sbjct 1336774 TTCATGAAGCGTGTTGAGAAGAACCAGG--ACTGGACTCTCTTCTGCCCTCACGAGGCGC 1336717
Query 110938 CTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAG 110997
||||||| ||||||||||||| || | || || | || || || ||||| || |
Sbjct 1336716 CTGGTCTTGCTGATGTATATGGTGAAAAATTCGAGGCTCTCTATGAGAAATACGAGCGGG 1336657
Query 110998 AAGGCAAGT-TTCG-CAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATC 111055
|||| | || ||| ||||| || ||| || | || |||| |||||||| |
Sbjct 1336656 AAGG-ACGTGGTCGTCAAAC-CATCAAAGCCCAGAAGCTGTGGTATGCTATCCTTGAGGC 1336599
Query 111056 ACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095
|| ||| ||||| || || || || ||||| || |||
Sbjct 1336598 TCAGACTGAGACTGGCACACCCTACATCTTGTACAAGGAT 1336559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810625536423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |