Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 seq1 84.2 2e-11 >seq2 Length=4294494 Score = 134 bits (148), Expect = 1e-26 Identities = 739/1170 (63%), Gaps = 13/1170 (1%) Strand=Plus/Plus Query 147247 TCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 ||| |||||| ||| || || || |||||||| | ||| |||| ||| | |||| | Sbjct 1336224 TCGAAAGGCAGACGTAGTGCCAGGAAAGCATCGGCAAGACCTTGGACACCAAGACCGACA 1336283 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCG-CTATGGGATAGTGGTTGCGATCAAT 147365 |||||||| | ||||||| ||| || ||| ||| ||| |||| |||| ||| || Sbjct 1336284 GGTCGATGTCTCATGTTGCTGTTCTTGGC-CTCAACTACGGGGTAGTAGTTGACATCGAT 1336342 Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425 |||||||| ||||| || ||||||| || | | ||| | || ||||| Sbjct 1336343 GATCTTGTTCAGGTTTCGAGTGACAACTTGGGTAACCTCATGGAGGCGGCCAAAGTCATA 1336402 Query 147426 AGTCCCGTCTTCGACACGTACGCATTGGTT--CACGGCGATAGACGCCAGATTGCAGACG 147483 || | || || | || || ||| || || | || || ||||||||||| Sbjct 1336403 T-TCGCCACT-CGCCTGGTCGACAAAGGTCGGCAGTGCCAGGGAGGCAAGATTGCAGACA 1336460 Query 147484 GCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 ||| ||| || |||| | |||||| || || || | |||| ||| || | || Sbjct 1336461 GCCACCTCATCAGGCGAAG-TGTACTCGACAATCTCCGTACACAAGTTTGAGCTTCGAAT 1336519 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||||| || | ||| ||||| ||| ||||| || || ||| | | ||||| || Sbjct 1336520 AGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAAGATGTAGGG 1336579 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATG-CAGGTCCTGCGCTCGCACCC 147661 | ||| ||||| || | |||| |||| | || ||| | ||| ||| | Sbjct 1336580 TGTGCCAGTCTCAGTCTGAGCCTCAAGGATAG-CATACCACAGCTTCTGGGCTTTGATGG 1336638 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || ||| || || || ||||| ||| || | ||| || | || || | Sbjct 1336639 TTTGACGACCACGTCCTTCCCGCTCGTATTTCTCATAGAGAGCCTCGAATTTTTCACCAT 1336698 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 | ||| ||||| || || || || || || | || | ||| | || | | Sbjct 1336699 ATACATCAGCAAGACCAGGCGCCTCGTGAGGGCAGAAGAGAGTCCAGTCCTGGTTCTTCT 1336758 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 ||| || ||| || ||||| || |||||||||||| | ||| || || || | Sbjct 1336759 CAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACGAGCACGGA 1336818 Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGG 147901 || || ||| ||| | |||| || | | | | ||| || || ||||| | Sbjct 1336819 CTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACATCTGCATGCCATG 1336878 Query 147902 GTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCA 147958 | || | ||||| ||| | |||||| |||||| || ||||||||||||| || Sbjct 1336879 GCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGGG 1336938 Query 147959 CCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAAT 148018 | ||||||| || || | | ||| || || || | | || || |||||| Sbjct 1336939 CAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCGG 1336998 Query 148019 TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACT 148078 || | ||| || || | ||| | || | ||||| ||||| || || Sbjct 1336999 CAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCAATACCGCCAGCGGTCT 1337058 Query 148079 TTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGA 148138 | || || ||| || | ||| ||||| || || |||||||| | || | Sbjct 1337059 TGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCA 1337118 Query 148139 CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGG 148198 | ||| || || || ||| ||| ||| || ||||||| || ||| || || | Sbjct 1337119 TGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAG 1337178 Query 148199 GACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGA 148258 || ||||| ||||| | || ||| ||| | | || ||||| || || | || | Sbjct 1337179 GAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAA 1337238 Query 148259 TGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAA 148318 ||| ||||| ||||| || | | || ||||| |||||||| ||||||||||| |||| Sbjct 1337239 CGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTCAGCAA 1337298 Query 148319 CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGT 148378 |||| ||| ||||||||| | |||| ||| | || ||| | |||||||| | || Sbjct 1337299 CTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGTATTGGT 1337358 Query 148379 AATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | | || ||| | || || | ||||||| Sbjct 1337359 AGTTGAAGTCTCGGTCATATACAATGGCCG 1337388 >seq1 Length=4470873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||| | | |||| |||||||| || ||||||||||||| ||| || |||||| || || Sbjct 3797825 ATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGTTG 3797766 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || || | |||| |||||||| ||||| ||||| || ||||| || || Sbjct 3797765 CTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTC 3797715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610348057480