Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
seq2 93.3 4e-14
>seq1
Length=4470873
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || || | || || ||| | ||||| | ||||||||| ||
Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || |||||| || ||||||||||| || || ||||||
Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| || | || | || ||||| ||||| ||||| | | ||| | || ||||||||
Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| || || |||||||| ||||| | || | ||||| |||| ||
Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304
>seq2
Length=4294494
Score = 93.3 bits (102), Expect = 4e-14
Identities = 190/277 (69%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 138126 AGCACGAATTTGAGTTA-CGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184
||||||||| ||| | | ||||| || || ||||| || || || ||||| ||||
Sbjct 1337015 AGCACGAATGC-AGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCAC 1337073
Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244
| ||||| || |||||| || | |||||||| |||| |||| | || | |
Sbjct 1337074 AGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGC 1337133
Query 138245 ACGACGACATTTGAGGCATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAA 138304
| || |||| ||||||| | | ||||| ||| || || ||| ||||| ||||
Sbjct 1337134 ATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAA 1337193
Query 138305 A-CATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGA 138363
| || || ||| ||| | | || | |||||| || |||| | ||||| ||||||
Sbjct 1337194 AGCACTTCTGAGA-CATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGA 1337252
Query 138364 ATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTC 138400
|| | || |||||||||||||||||||| ||||
Sbjct 1337253 ATACCGACAGACACACGCATCAGCATGTGTTGTGGTC 1337289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093604393760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |