Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq2 93.3 4e-14 >seq1 Length=4470873 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || ||| | ||||| | ||||||||| || Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || |||||| || ||||||||||| || || |||||| Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| || | || | || ||||| ||||| ||||| | | ||| | || |||||||| Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || |||||||| ||||| | || | ||||| |||| || Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304 >seq2 Length=4294494 Score = 93.3 bits (102), Expect = 4e-14 Identities = 190/277 (69%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 138126 AGCACGAATTTGAGTTA-CGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCAC 138184 ||||||||| ||| | | ||||| || || ||||| || || || ||||| |||| Sbjct 1337015 AGCACGAATGC-AGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCAC 1337073 Query 138185 AATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAAC 138244 | ||||| || |||||| || | |||||||| |||| |||| | || | | Sbjct 1337074 AGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGC 1337133 Query 138245 ACGACGACATTTGAGGCATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAA 138304 | || |||| ||||||| | | ||||| ||| || || ||| ||||| |||| Sbjct 1337134 ATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAA 1337193 Query 138305 A-CATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGA 138363 | || || ||| ||| | | || | |||||| || |||| | ||||| |||||| Sbjct 1337194 AGCACTTCTGAGA-CATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGA 1337252 Query 138364 ATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTC 138400 || | || |||||||||||||||||||| |||| Sbjct 1337253 ATACCGACAGACACACGCATCAGCATGTGTTGTGGTC 1337289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093604393760