Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 8e-18
seq2 96.9 5e-14
>seq5
Length=3385568
Score = 109 bits (120), Expect = 8e-18
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
||||||||||| || |||||||||||||||||| ||||||||||| ||||||| | ||
Sbjct 1867027 GGCGCCGTCGGGGCCCGCACCACCGAGAGCCAGCTGCACCGCGAGCTGGCGTCCGGCCTC 1867086
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTGG 165870
|| | ||| | |||||||| ||| |||||||||||| | |||
Sbjct 1867087 TCGTTCCCCGTGGGCTTCAAGAACGGCACCGACGGCACCCTGG 1867129
>seq2
Length=4294494
Score = 96.9 bits (106), Expect = 5e-14
Identities = 197/290 (68%), Gaps = 2/290 (1%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
|||||| ||| ||| || || ||| || | || ||||| || ||||| || ||||| |
Sbjct 1337210 CATGTCTCAGAAGTGCTTTAC-TCACGCCTCTCCTACGCTGTTCAATGCTGGAACGCCTC 1337152
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
|| || || || ||||| | | |||||||||| || || || || ||||
Sbjct 1337151 AGCCTCAATTGTCTTCATGCTTCTTAATTGACATGAAGGAGGACAGCATTGAAGGTATCT 1337092
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
||||||| |||||| || || | ||||||||| | || ||||| || ||| | |
Sbjct 1337091 ATGACACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCAATG 1337032
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
| ||| | || || | ||| | ||| | || |||||||| || ||||| || |
Sbjct 1337031 CTCACTGCATTCGTGCTACTGGCTCATACATTGCCGGCACCAATGGGACCTCCAATGGTC 1336972
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
| | || ||||| | || || ||| |||| || || || |||||||||
Sbjct 1336971 TCATCCCAATGCTCAGAGTCTTCAACAACACTGCCCGTTATGTCGACCAG 1336922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177797407387166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |