Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 109 8e-18 seq2 96.9 5e-14 >seq5 Length=3385568 Score = 109 bits (120), Expect = 8e-18 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 ||||||||||| || |||||||||||||||||| ||||||||||| ||||||| | || Sbjct 1867027 GGCGCCGTCGGGGCCCGCACCACCGAGAGCCAGCTGCACCGCGAGCTGGCGTCCGGCCTC 1867086 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTGG 165870 || | ||| | |||||||| ||| |||||||||||| | ||| Sbjct 1867087 TCGTTCCCCGTGGGCTTCAAGAACGGCACCGACGGCACCCTGG 1867129 >seq2 Length=4294494 Score = 96.9 bits (106), Expect = 5e-14 Identities = 197/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 |||||| ||| ||| || || ||| || | || ||||| || ||||| || ||||| | Sbjct 1337210 CATGTCTCAGAAGTGCTTTAC-TCACGCCTCTCCTACGCTGTTCAATGCTGGAACGCCTC 1337152 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || || || || ||||| | | |||||||||| || || || || |||| Sbjct 1337151 AGCCTCAATTGTCTTCATGCTTCTTAATTGACATGAAGGAGGACAGCATTGAAGGTATCT 1337092 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||||| |||||| || || | ||||||||| | || ||||| || ||| | | Sbjct 1337091 ATGACACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCAATG 1337032 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 | ||| | || || | ||| | ||| | || |||||||| || ||||| || | Sbjct 1337031 CTCACTGCATTCGTGCTACTGGCTCATACATTGCCGGCACCAATGGGACCTCCAATGGTC 1336972 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | | || ||||| | || || ||| |||| || || || ||||||||| Sbjct 1336971 TCATCCCAATGCTCAGAGTCTTCAACAACACTGCCCGTTATGTCGACCAG 1336922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797407387166