Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
seq3 82.4 7e-11
>seq1
Length=4470873
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| ||||| |||| || | ||| | || ||||| || ||||||||||| |
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| |||| || || ||||| || || || ||||| || ||||| |||| ||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG--CTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
| | ||| |||| | ||| ||||| ||||| | | | | ||||| ||||| |
Sbjct 3798184 ATACCCTCTTTGT-CTTGA-ATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGA 3798127
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| |||| ||||| ||||| ||||| | || || ||||| || |||||
Sbjct 3798126 CTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
>seq3
Length=4123400
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||||||||||| || || ||| ||||| | || || || ||||| || |||||
Sbjct 1163296 CCTTTTGAATGTTGTAGTC-GCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAG 1163238
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| || |||||||| | || | | |||||||| |||||| ||| | | |
Sbjct 1163237 ATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG 1163178
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | |||||| || |||||||| | ||||| || || |||||
Sbjct 1163177 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 1163131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792794206440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |