Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 seq3 82.4 7e-11 >seq1 Length=4470873 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| ||||| |||| || | ||| | || ||||| || ||||||||||| | Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| || || ||||| || || || ||||| || ||||| |||| || Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG--CTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | ||| |||| | ||| ||||| ||||| | | | | ||||| ||||| | Sbjct 3798184 ATACCCTCTTTGT-CTTGA-ATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGA 3798127 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||| ||||| ||||| ||||| | || || ||||| || ||||| Sbjct 3798126 CTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 >seq3 Length=4123400 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||| || || ||| ||||| | || || || ||||| || ||||| Sbjct 1163296 CCTTTTGAATGTTGTAGTC-GCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAG 1163238 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || |||||||| | || | | |||||||| |||||| ||| | | | Sbjct 1163237 ATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG 1163178 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| || |||||||| | ||||| || || ||||| Sbjct 1163177 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 1163131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792794206440