Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 129 6e-25 seq3 107 2e-18 seq2 91.5 1e-13 seq4 87.8 2e-12 >seq1 Length=4470873 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| || || |||||||||||||| || ||| | || || Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | |||||||||||||| ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || || |||||||| || ||||| || ||||| || Sbjct 3797938 ATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 3797879 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || |||||||||||||| Sbjct 3797878 CCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| | || || ||||| || || ||||||||||| || |||||||| || Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || || || |||||||| || ||||| || |||||||| || || Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| ||||||||||| || || ||| | ||||| || ||||| || Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || || | || || || || |||||||| Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| | ||| | ||| || ||| ||||||||| ||||||||||| | || || | Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | ||| ||||||||||| ||||| ||||| || || || || || || || Sbjct 3798463 CCA-TCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTC 3798405 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| ||||| ||||| ||| | ||||| ||||| || || || || || Sbjct 3798404 CTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGT 3798345 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || || ||||| || ||||| || ||||| Sbjct 3798344 AATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || || ||||| ||||| || |||||||||| Sbjct 3797848 CCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTC 3797789 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || || || || ||||| || || | |||||||||||| || || Sbjct 3797788 AGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGA 3797729 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | || || ||||| || Sbjct 3797728 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACC 3797669 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || ||||| ||||| || ||||| Sbjct 3797668 TCAAGAGTGATGGTCTTTCCGGT 3797646 >seq3 Length=4123400 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || ||||||||||||||||||||| || || | || ||||| || || || |||| Sbjct 1163299 ATACCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAA 1163240 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | ||||| || ||||| || || || || ||||| || ||||| || || ||||| Sbjct 1163239 AGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACAT 1163180 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | |||||||| || ||||| ||||| || ||||| || || || | || || | Sbjct 1163179 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 1163120 Query 134701 CGAA 134704 |||| Sbjct 1163119 CGAA 1163116 >seq2 Length=4294494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 279/426 (65%), Gaps = 14/426 (3%) Strand=Plus/Minus Query 8545 AACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTT--TGCCA 8602 |||||| | || |||| || || | || || |||||||| ||||| || || || || Sbjct 1336300 AACATGAGACATCGACCTGTCGGTCTTGGTGTCCAAGGTCTTGCCGATGCTTTCCTGGCA 1336241 Query 8603 TGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAA 8662 | || || || | ||| | |||||| | ||||||||| | || || | Sbjct 1336240 C--TACGTCTGCCTTTCGACTCTCCAGAAGCCAGACAGCTCAACATCCAGATCTTTGAGA 1336183 Query 8663 CGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACG 8722 | | || ||| |||||| ||| || | || ||| ||| ||||| || | Sbjct 1336182 CCATCTACCACGCCGCATTGACAGCATCTTGCGAGCTCGCCAAGGAACAAGGCACTTATG 1336123 Query 8723 AATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCA 8782 || | || | ||||||||| | | | || || | ||||| |||||||||||||||| Sbjct 1336122 AAACCTATGAGGGCAGCCCAGTCTCACAGGGCATCCTTCAATATGACATGTGGAATGTCA 1336063 Query 8783 CGCC----CACCTCTTTGTGGAATTGGAGCGATTTGAAACGCA-AAATTGCTCAATTCGG 8837 | || ||||| ||| | ||| | ||||| ||| |||||||| | ||| Sbjct 1336062 CTCCTTCTGACCTC----TGGGACTGGGATGGCCTGAAA-GCAGAAATTGCTAAGCACGG 1336008 Query 8838 TTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGG 8897 | | ||||| || || | || ||| ||||| || || ||||| | || || |||| Sbjct 1336007 TATCCGCAACTCCCTTCTTGTCGCTCCTATGCCTACTGCATCGACTTCCCAGATCTTGGG 1335948 Query 8898 AAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGG 8957 |||||||||| ||||||||| | ||| |||| | || |||| || ||||| || Sbjct 1335947 TAACAACGAATGCTTTGAGCCATACACATCCAACATCTATTCTCGACGTGTATTGGCTGG 1335888 Query 8958 CGATTT 8963 || || Sbjct 1335887 TGAATT 1335882 >seq4 Length=3720747 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||| || || || || ||||| || |||||||||||| | |||| | Sbjct 362421 AGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 362480 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| || || || || |||| ||| ||||| |||||||| || ||||| Sbjct 362481 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCC 362540 Query 134616 TTTTCT 134621 || ||| Sbjct 362541 TTGTCT 362546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397496600360