Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 6e-25
seq3 107 2e-18
seq2 91.5 1e-13
seq4 87.8 2e-12
>seq1
Length=4470873
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||| || || |||||||||||||| || ||| | || ||
Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
| |||||||||||||| ||||| || ||||| ||||| || ||||| || || || |||
Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | || || |||||||| || ||||| || ||||| ||
Sbjct 3797938 ATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTG 3797879
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || ||||||||||||||
Sbjct 3797878 CCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| | || || ||||| || || ||||||||||| || |||||||| ||
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || ||| || || || |||||||| || ||||| || |||||||| || ||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || ||||| ||||||||||| || || ||| | ||||| || ||||| ||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || ||||| || || | || || || || ||||||||
Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 113 bits (124), Expect = 5e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| | ||| | ||| || ||| ||||||||| ||||||||||| | || || |
Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || || | ||| ||||||||||| ||||| ||||| || || || || || || ||
Sbjct 3798463 CCA-TCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTC 3798405
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| ||||| ||||| ||||| ||| | ||||| ||||| || || || || ||
Sbjct 3798404 CTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGT 3798345
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||| || || || || ||||| || ||||| || |||||
Sbjct 3798344 AATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || || || ||||| ||||| || ||||||||||
Sbjct 3797848 CCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTC 3797789
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || || || || ||||| || || | |||||||||||| || ||
Sbjct 3797788 AGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGA 3797729
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || ||||| ||| | || || ||||| ||
Sbjct 3797728 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACC 3797669
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| ||||| ||||| || |||||
Sbjct 3797668 TCAAGAGTGATGGTCTTTCCGGT 3797646
>seq3
Length=4123400
Score = 107 bits (118), Expect = 2e-18
Identities = 134/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580
|| ||||||||||||||||||||| || || | || ||||| || || || ||||
Sbjct 1163299 ATACCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAA 1163240
Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640
| ||||| || ||||| || || || || ||||| || ||||| || || |||||
Sbjct 1163239 AGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACAT 1163180
Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700
||| | |||||||| || ||||| ||||| || ||||| || || || | || || |
Sbjct 1163179 TGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 1163120
Query 134701 CGAA 134704
||||
Sbjct 1163119 CGAA 1163116
>seq2
Length=4294494
Score = 91.5 bits (100), Expect = 1e-13
Identities = 279/426 (65%), Gaps = 14/426 (3%)
Strand=Plus/Minus
Query 8545 AACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTT--TGCCA 8602
|||||| | || |||| || || | || || |||||||| ||||| || || || ||
Sbjct 1336300 AACATGAGACATCGACCTGTCGGTCTTGGTGTCCAAGGTCTTGCCGATGCTTTCCTGGCA 1336241
Query 8603 TGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAA 8662
| || || || | ||| | |||||| | ||||||||| | || || |
Sbjct 1336240 C--TACGTCTGCCTTTCGACTCTCCAGAAGCCAGACAGCTCAACATCCAGATCTTTGAGA 1336183
Query 8663 CGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACG 8722
| | || ||| |||||| ||| || | || ||| ||| ||||| || |
Sbjct 1336182 CCATCTACCACGCCGCATTGACAGCATCTTGCGAGCTCGCCAAGGAACAAGGCACTTATG 1336123
Query 8723 AATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCA 8782
|| | || | ||||||||| | | | || || | ||||| ||||||||||||||||
Sbjct 1336122 AAACCTATGAGGGCAGCCCAGTCTCACAGGGCATCCTTCAATATGACATGTGGAATGTCA 1336063
Query 8783 CGCC----CACCTCTTTGTGGAATTGGAGCGATTTGAAACGCA-AAATTGCTCAATTCGG 8837
| || ||||| ||| | ||| | ||||| ||| |||||||| | |||
Sbjct 1336062 CTCCTTCTGACCTC----TGGGACTGGGATGGCCTGAAA-GCAGAAATTGCTAAGCACGG 1336008
Query 8838 TTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGG 8897
| | ||||| || || | || ||| ||||| || || ||||| | || || ||||
Sbjct 1336007 TATCCGCAACTCCCTTCTTGTCGCTCCTATGCCTACTGCATCGACTTCCCAGATCTTGGG 1335948
Query 8898 AAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGG 8957
|||||||||| ||||||||| | ||| |||| | || |||| || ||||| ||
Sbjct 1335947 TAACAACGAATGCTTTGAGCCATACACATCCAACATCTATTCTCGACGTGTATTGGCTGG 1335888
Query 8958 CGATTT 8963
|| ||
Sbjct 1335887 TGAATT 1335882
>seq4
Length=3720747
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || || || || ||||| || |||||||||||| | |||| |
Sbjct 362421 AGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 362480
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| || || || || |||| ||| ||||| |||||||| || |||||
Sbjct 362481 CCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCC 362540
Query 134616 TTTTCT 134621
|| |||
Sbjct 362541 TTGTCT 362546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397496600360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |