Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq1 96.9 3e-15 >seq2 Length=4294494 Score = 109 bits (120), Expect = 5e-19 Identities = 291/444 (66%), Gaps = 3/444 (1%) Strand=Plus/Plus Query 131638 GTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCT 131697 ||||| ||||| |||||||| || | ||| || ||| | |||||| || || || | Sbjct 1336751 GTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACG 1336810 Query 131698 AGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGC 131757 ||| |||||| | || | ||| |||| || |||||||| || | || || Sbjct 1336811 AGCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACATCTGC 1336870 Query 131758 ATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAAC 131814 |||||| || || | || | || | || ||| ||||| || || || | || Sbjct 1336871 ATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 1336930 Query 131815 ATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATT 131874 || ||| | |||||||| | || | | ||| || | ||| |||| | | ||||| Sbjct 1336931 ATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATT 1336990 Query 131875 GGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 ||||| |||||| |||| | || | || |||| | ||||| |||||||| || Sbjct 1336991 GGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCAATACCGCC 1337050 Query 131935 GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 || || ||||| | || || | | || |||| |||||||||||| | |||||| Sbjct 1337051 AGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTC 1337110 Query 131995 CGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAA 132054 | | ||||| | ||| ||||| || ||||| || | ||| || || || || Sbjct 1337111 CTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAA 1337170 Query 132055 CAATGTGGGGCTGGCGTGTGTAAA 132078 || || || |||||| ||||| Sbjct 1337171 CAGCGTAGGAGAGGCGTGAGTAAA 1337194 >seq1 Length=4470873 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 ||||||| || || || || ||| | || | || || |||||||| || | |||||||| Sbjct 3798234 CGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTT 3798175 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || || ||| | |||| | || | ||||| | || ||| ||||| || || | Sbjct 3798174 TGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGA 3798115 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| ||||||||| || || || ||||||||||||||| Sbjct 3798114 TAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCATA 3798077 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| |||||||||||||||| | |||| | ||||| || || || || Sbjct 3797818 GTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGTTGCTTTCCT 3797759 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| ||||| || || | || || || || ||||||| || Sbjct 3797758 GCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTG 3797699 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 | | | || | || || ||| ||| || || ||||| || Sbjct 3797698 ACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGAT 3797658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933659419016