Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 5e-19
seq1 96.9 3e-15
>seq2
Length=4294494
Score = 109 bits (120), Expect = 5e-19
Identities = 291/444 (66%), Gaps = 3/444 (1%)
Strand=Plus/Plus
Query 131638 GTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCT 131697
||||| ||||| |||||||| || | ||| || ||| | |||||| || || || |
Sbjct 1336751 GTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACG 1336810
Query 131698 AGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGC 131757
||| |||||| | || | ||| |||| || |||||||| || | || ||
Sbjct 1336811 AGCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACATCTGC 1336870
Query 131758 ATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAAC 131814
|||||| || || | || | || | || ||| ||||| || || || | ||
Sbjct 1336871 ATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 1336930
Query 131815 ATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATT 131874
|| ||| | |||||||| | || | | ||| || | ||| |||| | | |||||
Sbjct 1336931 ATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATT 1336990
Query 131875 GGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934
||||| |||||| |||| | || | || |||| | ||||| |||||||| ||
Sbjct 1336991 GGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCAATACCGCC 1337050
Query 131935 GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
|| || ||||| | || || | | || |||| |||||||||||| | ||||||
Sbjct 1337051 AGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTC 1337110
Query 131995 CGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAA 132054
| | ||||| | ||| ||||| || ||||| || | ||| || || || ||
Sbjct 1337111 CTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAA 1337170
Query 132055 CAATGTGGGGCTGGCGTGTGTAAA 132078
|| || || |||||| |||||
Sbjct 1337171 CAGCGTAGGAGAGGCGTGAGTAAA 1337194
>seq1
Length=4470873
Score = 96.9 bits (106), Expect = 3e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150
||||||| || || || || ||| | || | || || |||||||| || | ||||||||
Sbjct 3798234 CGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTT 3798175
Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210
| || || ||| | |||| | || | ||||| | || ||| ||||| || || |
Sbjct 3798174 TGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGA 3798115
Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| ||||||||| || || || |||||||||||||||
Sbjct 3798114 TAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCATA 3798077
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || |||||||| |||||||||||||||| | |||| | ||||| || || || ||
Sbjct 3797818 GTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAAGTTGCTTTCCT 3797759
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || |||||||| ||||| || || | || || || || ||||||| ||
Sbjct 3797758 GCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTG 3797699
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211
| | | || | || || ||| ||| || || ||||| ||
Sbjct 3797698 ACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGAT 3797658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933659419016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |