Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 226 4e-54 >seq2 Length=4294494 Score = 226 bits (250), Expect = 4e-54 Identities = 905/1404 (64%), Gaps = 53/1404 (4%) Strand=Plus/Plus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 |||||||| | ||||||||| ||||||||||| || ||||||||||| || | || || Sbjct 1335909 TAGATGTTGGATGTGTATGGCTCAAAGCATTCGTTGTTACCCAAGATCTGGGAAGTCGAT 1335968 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || ||||| || || | | ||| ||| || | ||| | || || | | Sbjct 1335969 GCAGTAGGCATAGGAGCGACAAGAAGGGAGTTGCGGATACCGTGCTTAGCAATTTCTGCT 1336028 Query 110828 TTGAGAACATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAA 110885 || || |||||||||| || | || || | || |||| |||||||| | |||| Sbjct 1336029 TTCAGGCCATCCCAGTCCCAGAGGTCAGAA-GGAGTGACATTCC-ACATGTCATATTGAA 1336086 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | | || || || | || |||||| |||||||||| | ||||| | | || | Sbjct 1336087 GGATGCCCTGTGAGACTGGGCTGCCCTCATAGGTTTCATAAGTGCCTTGTTCCTTGGCGA 1336146 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005 || || || || | ||||| || ||||| |||||||| | || | || Sbjct 1336147 GCTCGCAAGATGCTGTCAATGCGGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCT 1336206 Query 111006 CCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAG 111060 ||||||| || || || | ||||| | || ||| |||| || || Sbjct 1336207 GTCTGGCTTCTGGAGAGTCGAAAGGCAGACGTAGTGCCAGGAAAG-----CATCGGCAAG 1336261 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120 |||||| ||||| | ||| | ||||| |||| ||| || | ||| | | |||||| Sbjct 1336262 ACCTTGGACACCAAGACCGACAGGTCGATGTCTCATGTT-GCTGTTCTTG--GCCTCAAC 1336318 Query 111121 ---GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 111177 ||| || | || || |||| ||| || ||| || |||| | || | Sbjct 1336319 TACGGGGTAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACAACTTGGGTAAC 1336378 Query 111178 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 111237 ||||| || || | ||| | || | || | | | |||| | | || || || Sbjct 1336379 CTCATGGAGGCGGCCAAAGTCATATTCGCCACTCGCCTGGTCGACAAAGGTCGGCAGTGC 1336438 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 | || || | |||||| |||||| |||||| |||||||| | ||| || || Sbjct 1336439 CAGGGAGGCAAGATTGCAGACAGCCACCTCATCAGGCGAAGTGTACTCGACAATCTCCGT 1336498 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 ||| ||||| || || ||| || ||||| ||||| ||||| ||||||| |||||| || Sbjct 1336499 ACACAAGTTTGAGCTTCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGC 1336558 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||||||| | |||||||| || || ||||| ||||| | | || ||||| | ||| Sbjct 1336559 ATCCTTGTACAAGATGTAGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCA 1336618 Query 111418 -AACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 | | || | ||| || | || || | ||||| ||| |||||| || || Sbjct 1336619 CAGCTTCTG-GGCTTTGATGGTTTGACG--ACCACGTCCTTCCCGCTCGTATTTCTCATA 1336675 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 ||| || || || | ||||| | || | ||||| || |||| || || ||||| Sbjct 1336676 GAGAGCCTCGAATTTTTCACCATATACATCAGCAAGACCAGGCGCCTCGTGAGGGCAGAA 1336735 Query 111535 AAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 |||| ||| | || ||| |||||| |||||||||||||| || ||| ||||||| Sbjct 1336736 GAGAGTCCA--GTCCTGGTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGC 1336793 Query 111593 GATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651 | | || || || | | ||| || | ||||| | || ||||| || || | | Sbjct 1336794 GCGTAGAAAAGGTCACGAGCACGGA-CTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA 1336852 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 111711 || || | || ||| || ||||||||||| || |||| |||| | || | |||| Sbjct 1336853 AAAGTCAAAGACATCTGCATGCCATGGCTCGAGGTAGATGGCGAAGGCACC---TGGACG 1336909 Query 111712 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | ||| | || | ||||| || || ||| ||| || || | |||||||| || Sbjct 1336910 CTTGTTGCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGAT 1336969 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 | ||||| || ||||| || || ||| || | | || | ||| Sbjct 1336970 GAGACCATTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCAC-----GAATG 1337024 Query 111826 GA-TGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 | || |||| |||||||| ||||| ||| ||||| ||||| | | || Sbjct 1337025 CAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGT 1337084 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || |||||||||| | || ||||||||| || | || | |||||| |||| Sbjct 1337085 GTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAAT 1337144 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTG 111999 || || || || ||||||||||| || || || | |||||| | || || | || Sbjct 1337145 TGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTC-TG 1337203 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 ||||| || ||| ||||| | | | |||| ||| || || || || |||| | Sbjct 1337204 AGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGACAGA 1337263 Query 112060 GACCCGCATGAACATGTACTGTGG 112083 || ||||| | ||||| ||||| Sbjct 1337264 CACACGCATCAGCATGTGTTGTGG 1337287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030877392800