Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 235 2e-56 seq1 163 9e-35 seq8 96.9 1e-14 seq10 86.0 2e-11 >seq2 Length=4294494 Score = 235 bits (260), Expect = 2e-56 Identities = 495/732 (68%), Gaps = 6/732 (1%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| ||||||| || || || || || | | | | | |||| || | Sbjct 1079127 ATAGGTATCGATCTAGGTACAACCTACTCATGCGTAGGCATCTTCCGAGATGACCGCATC 1079186 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || |||||||| ||| |||| || || || | ||| || || ||||| Sbjct 1079187 GAAATCATTGCCAACGATCAAGGCAACCGAACCACCCCCTCGTTCGTCGCCTTCACCGAC 1079246 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 ||||||||| |||| |||||| ||||||| || |||| || || || | || || Sbjct 1079247 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAACCAAGTCGCCATGAACCCTCAGAACACA 1079306 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 ||||| ||||| |||||||| ||||| ||| || | ||| || |||| Sbjct 1079307 GTTTTCGATGCCAAGCGACTGATTGGCCGAAAGTTCGCGGACGCTGAGGTTCAGGCTGAC 1079366 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | || || || || || | || | | | ||| |||| || ||| | |||||||| Sbjct 1079367 ATGAAGCACTTCCCATTCAAGGTCAT-CGACAAG--GGTGGAAAGCCAGTCATTGAGGTC 1079423 Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 || | || || || | || ||||| ||| |||||||| ||||| ||||| | Sbjct 1079424 GAGTTCAAGGGCGAGAACAAGCAATTCACACCAGAAGAAATCTCATCCATGGTCCTGACC 1079483 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||| || | ||| || | ||| | || | || || | | || || || || Sbjct 1079484 AAGATGAGAGAGACTGCCGAGTCCTATCTTGGCGGCACTGTCAACAACGCAGTCATCACA 1079543 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || || || || | || ||| || || || || ||||| |||||| Sbjct 1079544 GTTCCCGCATACTTCAACGACTCTCAACGTCAAGCTACCAAGGACGCTGGTCTCATTGCC 1079603 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| || | || || || || || || || || || || || || || || Sbjct 1079604 GGCCTCAATGTGCTCCGTATCATCAACGAGCCTACCGCAGCTGCCATCGCCTACGGTCTC 1079663 Query 349742 GATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || | | | || || || |||| || || ||| | |||||||||||||| Sbjct 1079664 GACAAGAAG-GCCACTGGTGAGCGCAACGTTCTCATCTTCGATCTCGGTGGTGGTACTTT 1079722 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 ||||| ||||| | || | |||||||| || || ||||| || | ||||||||||| Sbjct 1079723 CGATGTTTCACTCTTGACCATCGAAGAGGGTATCTTCGAAGTCAAGTCCACTGCTGGTGA 1079782 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920 || || | ||||| || || ||||| || |||||||| ||||| |||| ||||| Sbjct 1079783 CACTCACTTGGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCATTTCGTTACTGAATT 1079842 Query 349921 TAAGCGTCAAGC 349932 ||||| ||||| Sbjct 1079843 CAAGCG-CAAGC 1079853 Score = 141 bits (156), Expect = 3e-28 Identities = 445/689 (65%), Gaps = 3/689 (0%) Strand=Plus/Plus Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 ||||| || || ||||| ||||| || | || || || | || ||||||||||| ||| Sbjct 1079956 ACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCCTCATCTGCTCAGACCTCTATTGAGATT 1080015 Query 350039 GATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 || ||||| || || | || |||| | || || || ||||| || || || || Sbjct 1080016 GACTCTCTCTACGAAGGTATTGACTTCTACACCTCGATCACTCGTGCACGTTTCGAGGAG 1080075 Query 350099 TTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCA 350158 | || ||| || || | | || ||||| || || || || | || || Sbjct 1080076 CTTTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTTGAGCGTGTCCTGCGTGACGCC 1080135 Query 350159 AAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCA 350218 || || ||| | | | || | || || || ||||||||||| ||||| || Sbjct 1080136 AAGATCGACAAGTCTTCCGTCCACGAGATCGTCTTGGTCGGTGGTTCTACTCGTATCCCC 1080195 Query 350219 AAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAAT 350278 || |||| || | | || || ||||| || || || ||||| | ||||| || Sbjct 1080196 AAGATTCAGAAGATGGTCTCCGATTTTTTCAACGGAAAGGAACCCAACAAGTCAATCAAC 1080255 Query 350279 CCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAG 350338 || ||||| ||||| || || || |||||||| ||||| |||| | ||||| | | Sbjct 1080256 CCCGATGAGGCTGTCGCCTACGGAGCTGCTGTCCAGGCTGCTATCCTGTCTGGTGACACT 1080315 Query 350339 AGTTCTAAA---ATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTA 350395 || || | | | || | || || || ||||| | || ||||| | || | Sbjct 1080316 TCATCCAAGTCGACTCAAGAAATCTTGCTTCTCGATGTTGCGCCGCTTTCTATCGGTATC 1080375 Query 350396 GAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAA 350455 || ||| |||||| || ||||||| ||| || | || | ||| | || || || Sbjct 1080376 GAGACTGCTGGTGGTGTCATGACTGCTCTCATCAAGCGCAACACTACCATTCCGACCAAG 1080435 Query 350456 AAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTT 350515 |||||| | ||||| || || || | || || ||||| | || || || || | Sbjct 1080436 AAGTCCGAGACTTTCTCGACCTTCTCCGACAACCAGCCGGGTGTGCTTATCCAGGTCTAC 1080495 Query 350516 GAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAA 350575 ||||| || ||||||||||| || || || || || || | ||| | | | Sbjct 1080496 GAAGGAGAGCGTGCTCGCACCAAGGACAACAACCTGCTAGGCAAGTTTGAATTGTCCGGA 1080555 Query 350576 ATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAAT 350635 ||||| || ||| | || ||||||||||| || ||| | |||||| ||||| | || Sbjct 1080556 ATTCCTCCTGCCCCTCGTGGTGTTCCTCAGATCGAGGTCACCTTCGATGTTGATGCCAAC 1080615 Query 350636 GGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||| | || || |||| ||||| || Sbjct 1080616 GGTATCATCAACGTCTCCGCCGTTGAGAA 1080644 Score = 87.8 bits (96), Expect = 5e-12 Identities = 204/306 (67%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 206444 CACACTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCAT 206503 ||| |||||| | ||| || || || || || || || | ||||| || || | ||||| Sbjct 1336918 CACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCAT 1336977 Query 206504 TAGAAGTTCCATTTGTTCCTCTAAT--ATGACTGCCAGTCCCTCTAATATTATGTATATG 206561 | || || ||||| || || ||| |||| |||||| | | ||| || || Sbjct 1336978 TGGAGGTCCCATTGGTGCCGGCAATGTATGA--GCCAGTAGCACGAATGCAGTGAGCATT 1337035 Query 206562 TAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAAT 206621 | ||||| || || || || || || ||||||| || | ||| | ||| || Sbjct 1337036 GAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGAT 1337095 Query 206622 TCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGG 206681 || |||| || || | ||| ||||||| || || ||| ||||| || | || Sbjct 1337096 ACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGG 1337155 Query 206682 CGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATT 206741 |||||||||||| || | ||||||| || || ||||| | || |||||||| | || Sbjct 1337156 CGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTT 1337215 Query 206742 ATAAGT 206747 ||||| Sbjct 1337216 GTAAGT 1337221 >seq1 Length=4470873 Score = 163 bits (180), Expect = 9e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| |||||||| || || ||||||||||| || || || || || || ||||| Sbjct 3798308 CATACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATC 3798249 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || ||||| ||||| || || || ||||| | ||||||||||| || Sbjct 3798248 TGAGAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGG 3798189 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || || ||||| || |||||||| ||| || ||||| ||||| | ||||| | || Sbjct 3798188 GGGGATACCCTCTTTGTCTTGAATTTT-GCTCTTCACATTGTCAATGGTGTCAGAGGATT 3798130 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| ||||| | || || || || || || || ||||| || ||||| Sbjct 3798129 CGACTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 159 bits (176), Expect = 1e-33 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || |||||||| || || || |||||||| ||||| | Sbjct 3797856 TTTGCATACCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGT 3797797 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || |||||||||||||| ||||| || ||||| ||||| ||||||| Sbjct 3797796 AGTCGCTCAGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGAT 3797737 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||||||||| || ||||| || || | || || || || |||| |||| | Sbjct 3797736 CAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGG 3797677 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || ||||| || | ||||||||||| Sbjct 3797676 ATTCGACCTCAAGAGTGATGGTCTTTCCGGT 3797646 Score = 122 bits (134), Expect = 3e-22 Identities = 170/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| ||||||||| | |||||| || | || ||||| || ||||| || || | Sbjct 3798540 TTTACTGACCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGT 3798481 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | || || ||||| || | || || || |||||||| | || || || | Sbjct 3798480 AGTCAGACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGT 3798421 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGAT 140681 |||| ||||| || || || || || ||||| ||| || || || || || | || || Sbjct 3798420 CAGGTGGAATACCCTCCTTGTCTTGGATTTT-GCTCTTGACGTTGTCGATAGTGTCCGAC 3798362 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||||||||| |||| ||||||||| || | || || || || |||||||| Sbjct 3798361 GACTCAACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 >seq8 Length=1997155 Score = 96.9 bits (106), Expect = 1e-14 Identities = 72/83 (87%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 235969 GACACCGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTATGGGATCGCG 236028 ||||| |||||||||||||||||||||| ||||||| ||||| ||| |||| |||| Sbjct 396216 GACACTATGGCCGAGTGGTTAAGGCGATGCCCTGCTAAGGCATTT-CCTTCGGGAGCGCG 396274 Query 236029 AGTTCGAATCTCGTCGGTGTCGA 236051 |||||||||||||| |||||||| Sbjct 396275 AGTTCGAATCTCGTTGGTGTCGA 396297 >seq10 Length=1601177 Score = 86.0 bits (94), Expect = 2e-11 Identities = 187/275 (68%), Gaps = 5/275 (2%) Strand=Plus/Minus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || |||||||| || || || |||| | || || || || || || ||| Sbjct 551687 ACCGTCCCAGCCTACTTCAACGACAACCAGAGACAGGCTACCAAGGACGCCGGTGCCATC 551628 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | |||||||| | || || || |||||||| ||||| || ||||| || || Sbjct 551627 GCTGGTCTCAATGTTCTCCGTATCATCAACGAACCCACCGCTGCCGCCATTGCTTACGGC 551568 Query 349739 CTTG-ATAAA--ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 |||| || | || ||| | || ||| | || || | ||| | ||||||||| Sbjct 551567 CTTGGATCCGGCAAGACCGACAAGGAGCGAAACGTCCTGATCTACGATCTCGGTGGTGGT 551508 Query 349796 ACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||||| ||||| || ||||| |||| | | | || |||| || || || ||||| Sbjct 551507 ACTTTCGATGTGTCTCTACTGAACA-TCCAGGGCGGTGTTTTCACTGTCAAGGCCACTGC 551449 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 ||||| || ||| | ||||| ||||||| |||| Sbjct 551448 CGGTGACACTCATTTGGGTGGTCAAGATTTCGATA 551414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251623769829