Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 199 4e-46
>seq2
Length=4294494
Score = 199 bits (220), Expect = 4e-46
Identities = 477/710 (67%), Gaps = 16/710 (2%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||| ||| || | ||| || |||| |||||| |||||| | || || ||||||||
Sbjct 1337224 GAGACTTACAACCTCATGTCTCAGAAGTGCTTTACTCACGCCTCTCCTACGCTGTTCAAT 1337165
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
||||| ||| ||| ||||| |||| |||||| | | | |||||||| |||
Sbjct 1337164 GCTGGAACGCCTCAGCCTCAATTGTCTTCATGCTTCTTAATTGACATGAAGGAGGACAGC 1337105
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || ||||| || || |||||| ||||| ||||||||| | || |||
Sbjct 1337104 ATTGAAGGTATCTATGACACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGT 1337045
Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| || | ||||| | | ||||| | ||| || || || || || ||
Sbjct 1337044 ATTGGTCTCAA-TGCTCACTGCATTCGTGCTACTGGCTCATACATTGCCGGCACCAATGG 1336986
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| || |||| || | || |||||| | |||||||||||||| ||||| || ||| |
Sbjct 1336985 GACCTCCAATGGTCTCATCCCAATGCTCAGAGTCTTCAACAACACTGCCCGTTATGTCGA 1336926
Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600
||||||||| ||||| | ||| | | |||||||||||||||||||| ||||| || |
Sbjct 1336925 CCAGGGTGGCAACAAGCGTCCAGGTGCC-TTCGCCATCTACCTCGAGCCATGGCATGCAG 1336867
Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGT 53659
| | | || ||| | | || | ||| || || | ||||| | || ||| |||
Sbjct 1336866 ATGTCTTTGACTTTTTGAACTTGAGAAAGAACCACGGCAAAGAAGAAGTCCG-TGCTCGT 1336808
Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718
||||| || ||| || ||||||| ||| || || |||||| | || |||||| || |
Sbjct 1336807 GACCTTTTCTAC-GCGCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACCA 1336749
Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778
||| ||| || | ||||| ||||| || || || | ||| || ||||| |
Sbjct 1336748 GGACTGGACTCTCTTCTGCCCTCACGAGGCGCCTGGTCTTGCTGATGTATATGGTGAAAA 1336689
Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCG----CTACAAGAAGAAGGTCA 53834
|| | | | ||| || |||| | || || | ||| | |||
Sbjct 1336688 ATTCGAGGCTCTCTATGAGAAATACGAGCGGGAAGGACGTGGTCGTCAA----ACCATCA 1336633
Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894
| || | || | ||| |||| ||||| || ||| ||||| || || || ||||
Sbjct 1336632 AAGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGCACACCCTACA 1336573
Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
| | ||||||||| | ||||||||||||||||||||||||| | |||
Sbjct 1336572 TCTTGTACAAGGATGCATGCAACGAGAAGAGCAACCAGAAGAACTTGGGC 1336523
Score = 82.4 bits (90), Expect = 8e-11
Identities = 104/142 (73%), Gaps = 6/142 (4%)
Strand=Plus/Minus
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT---TCATGGAGAA 55842
||| || |||||||| | |||||| ||||| || ||||| |||||| ||| ||||
Sbjct 1335698 TGCCGACCGTGGTGCCTTCATCGATCAGTCTCAATCTCTCAACATCCATCTCAAGGAG-- 1335641
Query 55843 TCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGAC 55902
|| | ||| |||| | | || ||||||||| || ||||||| ||| | |||||
Sbjct 1335640 -CCGACCATGGGCAAGATCACATCTATGCACTTTGCTGGCTGGAAGATGGGTTTGAAGAC 1335582
Query 55903 GGGTATGTACTATCTGCGGACC 55924
|| ||||||||||| || |||
Sbjct 1335581 TGGCATGTACTATCTCCGAACC 1335560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215021851400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |