Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 199 4e-46 >seq2 Length=4294494 Score = 199 bits (220), Expect = 4e-46 Identities = 477/710 (67%), Gaps = 16/710 (2%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| || | ||| || |||| |||||| |||||| | || || |||||||| Sbjct 1337224 GAGACTTACAACCTCATGTCTCAGAAGTGCTTTACTCACGCCTCTCCTACGCTGTTCAAT 1337165 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 ||||| ||| ||| ||||| |||| |||||| | | | |||||||| ||| Sbjct 1337164 GCTGGAACGCCTCAGCCTCAATTGTCTTCATGCTTCTTAATTGACATGAAGGAGGACAGC 1337105 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || ||||| || || |||||| ||||| ||||||||| | || ||| Sbjct 1337104 ATTGAAGGTATCTATGACACACTCAAGACCTGTGCTATGATCTCCAAGACCGCTGGCGGT 1337045 Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| || | ||||| | | ||||| | ||| || || || || || || Sbjct 1337044 ATTGGTCTCAA-TGCTCACTGCATTCGTGCTACTGGCTCATACATTGCCGGCACCAATGG 1336986 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | || |||| || | || |||||| | |||||||||||||| ||||| || ||| | Sbjct 1336985 GACCTCCAATGGTCTCATCCCAATGCTCAGAGTCTTCAACAACACTGCCCGTTATGTCGA 1336926 Query 53542 CCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 ||||||||| ||||| | ||| | | |||||||||||||||||||| ||||| || | Sbjct 1336925 CCAGGGTGGCAACAAGCGTCCAGGTGCC-TTCGCCATCTACCTCGAGCCATGGCATGCAG 1336867 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGT 53659 | | | || ||| | | || | ||| || || | ||||| | || ||| ||| Sbjct 1336866 ATGTCTTTGACTTTTTGAACTTGAGAAAGAACCACGGCAAAGAAGAAGTCCG-TGCTCGT 1336808 Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718 ||||| || ||| || ||||||| ||| || || |||||| | || |||||| || | Sbjct 1336807 GACCTTTTCTAC-GCGCTGTGGACTCCTGATCTTTTCATGAAGCGTGTTGAGAAGAACCA 1336749 Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778 ||| ||| || | ||||| ||||| || || || | ||| || ||||| | Sbjct 1336748 GGACTGGACTCTCTTCTGCCCTCACGAGGCGCCTGGTCTTGCTGATGTATATGGTGAAAA 1336689 Query 53779 GTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCG----CTACAAGAAGAAGGTCA 53834 || | | | ||| || |||| | || || | ||| | ||| Sbjct 1336688 ATTCGAGGCTCTCTATGAGAAATACGAGCGGGAAGGACGTGGTCGTCAA----ACCATCA 1336633 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 | || | || | ||| |||| ||||| || ||| ||||| || || || |||| Sbjct 1336632 AAGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGCACACCCTACA 1336573 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 | | ||||||||| | ||||||||||||||||||||||||| | ||| Sbjct 1336572 TCTTGTACAAGGATGCATGCAACGAGAAGAGCAACCAGAAGAACTTGGGC 1336523 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/142 (73%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT---TCATGGAGAA 55842 ||| || |||||||| | |||||| ||||| || ||||| |||||| ||| |||| Sbjct 1335698 TGCCGACCGTGGTGCCTTCATCGATCAGTCTCAATCTCTCAACATCCATCTCAAGGAG-- 1335641 Query 55843 TCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGAC 55902 || | ||| |||| | | || ||||||||| || ||||||| ||| | ||||| Sbjct 1335640 -CCGACCATGGGCAAGATCACATCTATGCACTTTGCTGGCTGGAAGATGGGTTTGAAGAC 1335582 Query 55903 GGGTATGTACTATCTGCGGACC 55924 || ||||||||||| || ||| Sbjct 1335581 TGGCATGTACTATCTCCGAACC 1335560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215021851400