Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 187 3e-42 seq1 167 3e-36 seq3 116 4e-21 >seq2 Length=4294494 Score = 187 bits (206), Expect = 3e-42 Identities = 630/967 (65%), Gaps = 27/967 (3%) Strand=Plus/Plus Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 ||||| |||| |||||||| ||||||||| || || ||||| | ||||| ||| Sbjct 1336323 GGGTAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACAACTTGGGTAACCTCA 1336382 Query 80854 TGAAGTTTCTGAAAGTCGAATTGGT---TCCCCT--TC-ACAAATGCCGGAAGGCTCAGG 80907 || || |||||| ||| | || ||| || ||||| | ||| || |||| Sbjct 1336383 TGGAGGCGGCCAAAGTCATATTCGCCACTCGCCTGGTCGACAAAGGTCGGCAGTGCCAGG 1336442 Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || || |||||||| || |||||||| |||| || ||||||| || ||||| ||| Sbjct 1336443 GAGGCAAGATTGCAGACAGCCACCTCATCAGGCGAAGTGTACTCGACAATCTCCGTACAC 1336502 Query 80968 AAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025 || || || ||| ||| || |||| ||| |||||||| ||| ||||||| || | Sbjct 1336503 AAGTTTGAG--CTTCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTCGTTGCATGCAT 1336560 Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085 ||||||| | ||||| || || || ||||| ||| | || ||||| || | ||| | Sbjct 1336561 CCTTGTACAAGATGTAGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACA 1336620 Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTG-CCTTCGGCCACATACTTGGCGTAAGCT 81144 || | || |||| ||| || | ||||| | | || || | || Sbjct 1336621 GCTTCTGGGCTTTGATGGT-TTGACGACCACGTCCTTCCCGCTCGTATTTCTCATAGAGA 1336679 Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 | ||||| || |||| | | |||| || | || ||||| |||||| | || Sbjct 1336680 GCCTCGAATTTTTCACCATATACATCAGCAAGACCAGGCGCCTCGTGAGGGCAGAAGAGA 1336739 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264 |||||| || ||||| ||| |||||||||| ||||| |||| || ||| | Sbjct 1336740 GTCCAGTCCTGGTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAG 1336799 Query 81265 AACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323 || ||||| || ||| || | || || | || ||||| | ||| | | |||||| Sbjct 1336800 AAAAGGTCACGAGCA-CGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTC 1336858 Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------ 81377 | || || |||||||||||||| || || | ||||| | | ||| |||| Sbjct 1336859 AAAGACATCTGCATGCCATGGCTCGAGGTAGATGGCGA-AGGCACCT--GGACGCTTGTT 1336915 Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 ||||||||||| ||| ||||||||||| ||| || || | | ||| ||||||| ||| Sbjct 1336916 GCCACCCTGGTCGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACC 1336975 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATT 81495 || || || || || || | || || || | || || | | || ||| Sbjct 1336976 ATTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATT 1337035 Query 81496 GAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555 | ||||| || || || | ||| || ||| |||||| || | || ||||| Sbjct 1337036 G--AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAG 1337093 Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT 81615 || || || ||||| || | |||||||||| ||||| || |||| ||||| Sbjct 1337094 ATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGA 1337153 Query 81616 TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGG 81675 | || ||||||||||| || || | |||||| | || | | ||||| ||| Sbjct 1337154 GGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGG 1337213 Query 81676 TCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATA 81735 | || || || || | || || || || |||||||||| || |||||||| Sbjct 1337214 TTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGACAGACACACGCATC 1337273 Query 81736 AACATGT 81742 | ||||| Sbjct 1337274 AGCATGT 1337280 Score = 100 bits (110), Expect = 3e-16 Identities = 285/431 (66%), Gaps = 8/431 (2%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || || |||||| ||||| ||||| || ||||| || | || || ||| Sbjct 3201901 GATGGTCTAAAGCCTGGTCAGCGAAAGGTCATGTACGCATGTTTTAAACGAAATCTGAAA 3201960 Query 32044 AGTGACATGAAGGTGGCGCAGCT-GTCGGGCTACGTGGCAGAGCAA--ACGGCCTATCAC 32100 | || |||||||| || |||| | | || ||| ||| | | || || || ||| Sbjct 3201961 AAGGATATGAAGGTCGCCGAGCTTGCCTCTCT-CGT--CAGTGGTATGACTGCTTACCAC 3202017 Query 32101 CACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCA 32160 |||||||| | || || ||| ||||| ||| || || ||||| || || || | Sbjct 3202018 CACGGCGACACTTCCCTACAGCAAACCATCGTCGGTCTGGCACAGAATTTCGTGGGATCC 3202077 Query 32161 AATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAG 32220 || ||| | ||| |||| | || || || ||||| || || || | || ||||| Sbjct 3202078 AACAACGTCAACCTACTGGTTCCTTCCGGCCAGTTCGGCACGCGAAACCAGGGCGGCAAC 3202137 Query 32221 GATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACC-TTCGACGCGCAAGATTTT 32279 ||| ||| ||| | ||||| ||||||||||| ||| | || |||| | | ||| | || Sbjct 3202138 GATTGTGCCAGCGCTCGTTATATCTTCACCCGACTCTCTCCATTCG-CCAGGAAGCTGTT 3202196 Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339 | ||| | | ||||| || | |||| |||||| ||||| | | | ||||||| Sbjct 3202197 CCACCAGGCTGACGAGCCGCTTCTCACCTACAATACAGATGATGAACGGAAAATCGAGCC 3202256 Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399 | |||| || || |||| |||||| | || || || || || || || || || Sbjct 3202257 TGAAATCTATGCCCCCGTAATTCCTATGATCCTCGTCAATGGAGCTGATGGTATTGGTAC 3202316 Query 32400 GGGGTTCAGTT 32410 ||| | |||| Sbjct 3202317 GGGCTGGAGTT 3202327 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/146 (74%), Gaps = 6/146 (4%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || |||||||||||||| ||||| | ||| |||||||||| | ||||||||| Sbjct 1335561 GTTCGGAGATAGTACATGCCAGTCTTCAAACCCATCTTCCAGCCAGCAAAGTGCATAGAT 1335620 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGA---AGATGTTCAGAGACTGAGACTGACAG 80154 ||| ||| | | || || |||| ||| |||||| ||||| ||||||||| | Sbjct 1335621 GTGATCTTGCCCATGGTCGG---CTCCTTGAGATGGATGTTGAGAGATTGAGACTGATCG 1335677 Query 80155 ATGAAAGCCCCACGATCTGCCGCCAT 80180 ||||| || ||||| || || ||||| Sbjct 1335678 ATGAAGGCACCACGGTCGGCAGCCAT 1335703 >seq1 Length=4470873 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||||||||| || || || |||||||| || | Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| || ||||||||||||||||| |||||||| |||||| Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || || ||| | || |||| || || || ||||||| || Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||||| ||||| || ||| | ||||||||||| || Sbjct 3798030 ATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTTCGCGGCGG 3798076 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| ||||| ||||| ||||| || || || || || || | Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| |||||||| ||||| ||||| || || || || ||| Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || |||||||| || || | ||| || || |||| || || Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||||||||| ||| || | | || ||||| Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGG 3798304 Score = 158 bits (174), Expect = 1e-33 Identities = 159/204 (78%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || ||||||||||| || || |||||| || | || | ||| | Sbjct 3797646 ACCGGAAAGACCATCACTCTTGAGGTCGAATCCAGTGATACGATCGACAACGTCAAGTCC 3797705 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 3797706 AAGATCCAGGACAAGGAAGGAATTCCTCCTGATCAGCAGCGTCTTATCTTCGCAGGAAAG 3797765 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||||| || |||| || ||||| ||| ||||| ||| ||||||| ||||| || || || Sbjct 3797766 CAACTTGAAGATGGCCGCACCCTGAGC-GACTACAATATCCAAAAAGAATCAACCCTCCA 3797824 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||| | ||||| || ||||| Sbjct 3797825 TCTTGTCCTCCGTCTCCGTGGTGG 3797848 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| ||||| ||||| |||||||| Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| ||||| || ||||||||||| ||||| || ||||| Sbjct 3798366 GACACTATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGTATTCCACCTGACCAA 3798425 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || ||||| | ||||||| || || || | ||||| || Sbjct 3798426 CAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACAAC 3798485 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||||||||| |||||| || | || | | ||||| ||||| || Sbjct 3798486 ATCCAAAAGGAAAGCACTCTGCACTTGGTGCTAAGACTTCGTGGTGGTCA 3798535 >seq3 Length=4123400 Score = 116 bits (128), Expect = 4e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 1163115 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCAT 1163174 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || || |||||||| ||||| || || |||||||| || | Sbjct 1163175 CGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATT 1163234 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCCAAA 27592 || ||||| || |||||||||||||||| || || | |||| ||||| || | |||| Sbjct 1163235 GATCTTTGCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGC-GACTACAACATTCAAA 1163293 Query 27593 AGGAAT 27598 ||| || Sbjct 1163294 AGGTAT 1163299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309380570160