Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 6e-16
>seq1
Length=4470873
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| || |||||||| |||||||| ||||| || || || || || || | || ||
Sbjct 3798515 CACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCCTC 3798456
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
| || || || ||||| || || ||||||||||| || || | ||||||||||||
Sbjct 3798455 CAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCTTG 3798396
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
||| ||| | || ||| | || ||||| ||| ||||| | ||| || || |
Sbjct 3798395 GAT-TTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTCT 3798337
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || || || || ||||||||
Sbjct 3798336 TTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | || | || || ||| ||| || |||||||| || ||||||
Sbjct 3798076 CCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAA 3798017
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | |||||| || ||||| || || || || ||||| || ||
Sbjct 3798016 AGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 3797957
Query 34600 ACTCCCTCCTTGTC 34613
| |||||||||||
Sbjct 3797956 ATGCCCTCCTTGTC 3797943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729051485319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |