Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 8e-23
seq4 82.4 7e-11
>seq1
Length=4470873
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || ||||| |||| || || ||||| ||| | ||
Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||||||||||||||| || || || || |||||
Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | ||| ||||| ||| | |||||| || || | || |||||||||
Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | ||| | || || | || || ||||| ||
Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGGTAT 3798307
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || |||||||||||| | || || || || || ||| ||||
Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| ||||| || ||||| || ||||| ||
Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | || ||||||||||| ||||| | || |||| || ||||||
Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029
Query 27168 ATTCAAAAGGAGTCGACC 27185
||||| || ||||| |||
Sbjct 3798030 ATTCAGAAAGAGTCCACC 3798047
>seq4
Length=3720747
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| ||||| || || ||||| || || ||| | || | |||||| || || | ||
Sbjct 362546 AGACAAGGAAGGAATCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAGCTCGA 362487
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||| | ||| | ||||| |||||||| || |||||||||||| | ||| | || |
Sbjct 362486 GGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCATCTCGTCCT 362427
Query 27200 GCGTTTGCGGGGTGG 27214
||| |||| |||||
Sbjct 362426 GCGCCTGCGTGGTGG 362412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917622583360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |