Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 seq4 82.4 7e-11 >seq1 Length=4470873 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || ||||| |||| || || ||||| ||| | || Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||||||||| || || || || ||||| Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| ||||| ||| | |||||| || || | || ||||||||| Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||| | || || | || || ||||| || Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGGTAT 3798307 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||||||||||| | || || || || || ||| |||| Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || ||||| ||||| || ||||| || ||||| || Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | || ||||||||||| ||||| | || |||| || |||||| Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029 Query 27168 ATTCAAAAGGAGTCGACC 27185 ||||| || ||||| ||| Sbjct 3798030 ATTCAGAAAGAGTCCACC 3798047 >seq4 Length=3720747 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| ||||| || || ||||| || || ||| | || | |||||| || || | || Sbjct 362546 AGACAAGGAAGGAATCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAGCTCGA 362487 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||| | ||| | ||||| |||||||| || |||||||||||| | ||| | || | Sbjct 362486 GGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCATCTCGTCCT 362427 Query 27200 GCGTTTGCGGGGTGG 27214 ||| |||| ||||| Sbjct 362426 GCGCCTGCGTGGTGG 362412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917622583360