Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 4e-31
seq3 120 7e-22
seq4 100 7e-16
>seq1
Length=4470873
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||||||| || || ||||||||||| || |||| |||||||| | | ||||| ||
Sbjct 3798293 TCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACC 3798234
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| || |||||||| | |||||| || || || || ||||| || ||
Sbjct 3798233 GTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTT 3798174
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| || || ||||||| || |||||||| |||| ||| || || | |||||
Sbjct 3798173 GTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGAT 3798114
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| | || || | || | ||||||
Sbjct 3798113 AGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||||||||| || ||||| ||||| || | ||||| || | | |||
Sbjct 3798070 CGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTG 3798011
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||||| || || || || ||||| | ||||| |||||||| ||||| ||
Sbjct 3798010 CGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCC 3797951
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| || ||||| ||| ||| |||||||| || || | ||| || || |
Sbjct 3797950 TCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGG 3797891
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| |||| || || | ||| | ||||||
Sbjct 3797890 GTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||| || || | ||| |||||| ||| ||||||| ||||| || | || ||
Sbjct 3798527 ACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGT 3798468
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || | |||||| || || ||||| | ||| |||||||| || ||||||||
Sbjct 3798467 CCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACC 3798408
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||| || ||| || ||||| ||||| || | || || || |
Sbjct 3798407 CTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAG 3798348
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || |||||||| || | ||| | |||||
Sbjct 3798347 GGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||| ||||| || ||||||||||||| |||||| ||| || || | ||||||
Sbjct 3797833 AGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCT 3797774
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || ||||||||||| || || || || || ||||| |||||||||||
Sbjct 3797773 TCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCC 3797714
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| || || || ||| || || | ||||| |||
Sbjct 3797713 TGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTC 3797654
Query 225682 TTGCCCGT 225689
|| || ||
Sbjct 3797653 TTTCCGGT 3797646
>seq3
Length=4123400
Score = 120 bits (132), Expect = 7e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||| | ||||| ||| | ||||| ||||| || || ||||| || || |||||
Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| |||||| ||||| || || || |||||||||||||||||||| ||| ||| |||
Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 1163175
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| || | ||||| || | ||||| |||||||||||
Sbjct 1163174 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 1163131
>seq4
Length=3720747
Score = 100 bits (110), Expect = 7e-16
Identities = 100/130 (77%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | |||||| || ||||| || || || || |||| ||||| |||| | ||
Sbjct 362417 ACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 362476
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || ||||| ||||||||||| || ||
Sbjct 362477 GCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCC 362536
Query 225612 TTCCTTGTCT 225621
||||||||||
Sbjct 362537 TTCCTTGTCT 362546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529015059242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |