Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 194 2e-44 >seq2 Length=4294494 Score = 194 bits (214), Expect = 2e-44 Identities = 437/649 (67%), Gaps = 11/649 (2%) Strand=Plus/Plus Query 76589 TCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 76648 ||||| | ||| || ||||| || |||||||| |||| || || || || || || Sbjct 1336753 TCTTC-TCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACGA 1336811 Query 76649 GTTCTACGTTCTTCATTTCCTGTATTCTTTTT-AAGATCTAGGAACTCCATAATATCAGA 76707 | | |||||| || || |||||| | ||| || | || || | | ||| | Sbjct 1336812 GCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAA-AAGTCAAAGACATCTGC 1336870 Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767 ||||||||| || || || || || | |||| || || || || || ||||| || | Sbjct 1336871 ATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 1336930 Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827 ||| | ||||||||| || | ||||| | |||||| || | || || || || ||||| Sbjct 1336931 ATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATT 1336990 Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCT 76885 || || | ||| || ||| |||||||| | | || || | || || || Sbjct 1336991 GGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGA--CCAATACCG 1337048 Query 76886 CCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTA 76945 || || | || ||||| | ||||||| || | |||||||||||| || || || || Sbjct 1337049 CCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTG 1337108 Query 76946 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 77005 || ||| |||||| || | || || ||||| |||| | ||| ||||| ||||| Sbjct 1337109 TCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTG 1337168 Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065 |||| |||||||| || ||||| || || || | ||| | || ||||| || || || Sbjct 1337169 AACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATG 1337228 Query 77066 ACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 | ||||| | ||| | |||||| || |||| |||||||||| ||| || || | Sbjct 1337229 GC--CTTCTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTG 1337286 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 ||||||| || | || || || | ||| |||||| |||||| || || || | Sbjct 1337287 GTCGTTCAGCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGC 1337346 Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||| || | ||| ||||||| || || | ||| |||| || || Sbjct 1337347 CAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAG 1337395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933125629760