Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2 194 2e-44
>seq2
Length=4294494
Score = 194 bits (214), Expect = 2e-44
Identities = 437/649 (67%), Gaps = 11/649 (2%)
Strand=Plus/Plus
Query 76589 TCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 76648
||||| | ||| || ||||| || |||||||| |||| || || || || || ||
Sbjct 1336753 TCTTC-TCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACGA 1336811
Query 76649 GTTCTACGTTCTTCATTTCCTGTATTCTTTTT-AAGATCTAGGAACTCCATAATATCAGA 76707
| | |||||| || || |||||| | ||| || | || || | | ||| |
Sbjct 1336812 GCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAA-AAGTCAAAGACATCTGC 1336870
Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767
||||||||| || || || || || | |||| || || || || || ||||| || |
Sbjct 1336871 ATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGAC 1336930
Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827
||| | ||||||||| || | ||||| | |||||| || | || || || || |||||
Sbjct 1336931 ATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATT 1336990
Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCT 76885
|| || | ||| || ||| |||||||| | | || || | || || ||
Sbjct 1336991 GGTGCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGA--CCAATACCG 1337048
Query 76886 CCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTA 76945
|| || | || ||||| | ||||||| || | |||||||||||| || || || ||
Sbjct 1337049 CCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTG 1337108
Query 76946 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 77005
|| ||| |||||| || | || || ||||| |||| | ||| ||||| |||||
Sbjct 1337109 TCCTCCTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTG 1337168
Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065
|||| |||||||| || ||||| || || || | ||| | || ||||| || || ||
Sbjct 1337169 AACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATG 1337228
Query 77066 ACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123
| ||||| | ||| | |||||| || |||| |||||||||| ||| || || |
Sbjct 1337229 GC--CTTCTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTG 1337286
Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183
||||||| || | || || || | ||| |||||| |||||| || || || |
Sbjct 1337287 GTCGTTCAGCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGC 1337346
Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232
|||| || | ||| ||||||| || || | ||| |||| || ||
Sbjct 1337347 CAAAGTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAG 1337395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933125629760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |