Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 1e-25
seq3 111 4e-19
seq4 84.2 5e-11
>seq1
Length=4470873
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| ||||| ||||||||||| || || || |||||||||||||| | | ||||| ||
Sbjct 3798293 TCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACC 3798234
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||||| || || |||||||| | | ||||| |||| | ||| || || ||
Sbjct 3798233 GTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTT 3798174
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||||||||| || ||| | || | | |||| || || ||||| || || ||
Sbjct 3798173 GTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGAT 3798114
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||||||| || ||||| || |||| |||||
Sbjct 3798113 AGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 89.7 bits (98), Expect = 1e-12
Identities = 103/137 (75%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||||||||| || || || ||||||||||| ||||| ||| | || |
Sbjct 3797840 GAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCG 3797781
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|||||||| || ||||| || ||||||||||| | |||||| || | | ||||||
Sbjct 3797780 GCCATCTTCAAGTTGCTTT--CCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCT 3797723
Query 152004 TCCTTTTCTTGAATTTT 152020
||||| || || || ||
Sbjct 3797722 TCCTTGTCCTGGATCTT 3797706
>seq3
Length=4123400
Score = 111 bits (122), Expect = 4e-19
Identities = 137/183 (75%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAG 151973
||||| |||||||| ||| |||| ||||| ||||| || || ||||| ||||| |||
Sbjct 1163294 TTTTGAATGTTGTAGTCG-CTAAGAGTTCGGCCATCCTCGAGTTGCTTT--CCGGCAAAG 1163238
Query 151974 ATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033
|| | | |||||||| | | |||||||||||| ||||| || || |||||| |
Sbjct 1163237 ATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG 1163178
Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093
|| | | |||| ||| ||| || || || || || || ||||||||||| ||||| |||
Sbjct 1163177 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1163118
Query 152094 AAG 152096
|||
Sbjct 1163117 AAG 1163115
>seq4
Length=3720747
Score = 84.2 bits (92), Expect = 5e-11
Identities = 93/122 (76%), Gaps = 4/122 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || || ||||| || ||||||||||| |||| | || | || ||
Sbjct 362427 AGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 362486
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||||||||| || | |||||||| | || |||||||||||| |
Sbjct 362487 TCGAGCTGCTTT--CCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGT 362544
Query 152011 CT 152012
||
Sbjct 362545 CT 362546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818685983953
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |