Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq3 111 4e-19 seq4 84.2 5e-11 >seq1 Length=4470873 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| ||||||||||| || || || |||||||||||||| | | ||||| || Sbjct 3798293 TCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACC 3798234 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| || || |||||||| | | ||||| |||| | ||| || || || Sbjct 3798233 GTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTT 3798174 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| || ||| | || | | |||| || || ||||| || || || Sbjct 3798173 GTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGAT 3798114 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||||||| || ||||| || |||| ||||| Sbjct 3798113 AGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/137 (75%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| || || || ||||||||||| ||||| ||| | || | Sbjct 3797840 GAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCG 3797781 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||||| || ||||||||||| | |||||| || | | |||||| Sbjct 3797780 GCCATCTTCAAGTTGCTTT--CCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCT 3797723 Query 152004 TCCTTTTCTTGAATTTT 152020 ||||| || || || || Sbjct 3797722 TCCTTGTCCTGGATCTT 3797706 >seq3 Length=4123400 Score = 111 bits (122), Expect = 4e-19 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAG 151973 ||||| |||||||| ||| |||| ||||| ||||| || || ||||| ||||| ||| Sbjct 1163294 TTTTGAATGTTGTAGTCG-CTAAGAGTTCGGCCATCCTCGAGTTGCTTT--CCGGCAAAG 1163238 Query 151974 ATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033 || | | |||||||| | | |||||||||||| ||||| || || |||||| | Sbjct 1163237 ATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG 1163178 Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093 || | | |||| ||| ||| || || || || || || ||||||||||| ||||| ||| Sbjct 1163177 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1163118 Query 152094 AAG 152096 ||| Sbjct 1163117 AAG 1163115 >seq4 Length=3720747 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/122 (76%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || ||||||||||| |||| | || | || || Sbjct 362427 AGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 362486 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | |||||||| | || |||||||||||| | Sbjct 362487 TCGAGCTGCTTT--CCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGT 362544 Query 152011 CT 152012 || Sbjct 362545 CT 362546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818685983953