Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 217 3e-51 seq3 156 9e-33 seq4 111 3e-19 >seq1 Length=4470873 Score = 217 bits (240), Expect = 3e-51 Identities = 187/229 (82%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | |||||||| ||||||||||||||||||| Sbjct 3798533 ACCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGA 3798474 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| | || || || ||||||||||| || ||||||||| || Sbjct 3798473 CAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGG 3798414 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||||||||||||| |||||| || ||| | |||||||||||||| | || | Sbjct 3798413 AATACCCTCCTTGTCTTGGAT-TTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAA 3798355 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| || || || ||||| || ||||||||||| ||||| |||||||| Sbjct 3798354 CTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || || || || || || | ||| ||||| || ||||||||||| | Sbjct 3798077 ACCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 3798018 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| |||| |||||| || ||||||||||| ||||| ||||| || Sbjct 3798017 AAGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGG 3797958 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| || ||| ||||| ||||| | ||||| || || || | ||| | Sbjct 3797957 AATGCCCTCCTTGTCCTGAATC-TTGCTCTTTACATTGTCGATGGTATCAGACGATTCAA 3797899 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 3797898 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | || |||||||||||| |||||||| Sbjct 3797849 ACCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCT 3797790 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || ||||| || || || ||||| | ||| || || ||| || Sbjct 3797789 CAGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGG 3797730 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | || ||| | ||||| || || | |||||| Sbjct 3797729 AATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGAC 3797670 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || |||||||| ||||| || || Sbjct 3797669 CTCAAGAGTGATGGTCTTTCCGGT 3797646 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || | | || || ||||| | ||| ||| || ||||||||||| || | Sbjct 3798305 ACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGA 3798246 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || || |||||||| || || || |||||||| ||||| || || || Sbjct 3798245 GAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGG 3798186 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||| |||||||| || |||||| || || | || || ||||| || | ||||| Sbjct 3798185 GATACCCTCTTTGTCTTGAAT-TTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGA 3798127 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| || ||||| || || ||||| | ||||| || || || ||||| Sbjct 3798126 CTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 >seq3 Length=4123400 Score = 156 bits (172), Expect = 9e-33 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||| ||||||||||| ||| || ||||||||||| ||||| || |||||||||||| Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || ||||| |||||| || || || ||||||||||||||||| | || || | ||| Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 1163175 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| |||| || || ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 1163174 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116 >seq4 Length=3720747 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || ||||| | || || || |||||||||||||| | Sbjct 362411 ACCACCACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 362470 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| |||||| ||||| ||| Sbjct 362471 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 362530 Query 282992 AATACCCTCCTTGTCT 283007 || || ||||||||| Sbjct 362531 GATTCCTTCCTTGTCT 362546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737282177522