Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq3 109 4e-19 >seq1 Length=4470873 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| | ||||| || || ||||| ||| ||||| |||||||||||||| Sbjct 3798308 CATACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATC 3798249 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| || |||| || || ||||| || || |||||||| || |||||||| | Sbjct 3798248 TGAGAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGG 3798189 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| || || || || || ||||| | | |||||||| | |||||| Sbjct 3798188 GGGGATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTC 3798129 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || || || ||||| |||||||| || ||||||||||| Sbjct 3798128 GACTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 113 bits (124), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| | ||||| ||| || ||||| ||||||||||||||||| || | || || Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| |||||| || ||||||||||| ||||| || || | || | ||| ||| Sbjct 3798463 CCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCC 3798404 Query 44240 TTTTCCGTTATCTTCTGCT-TCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 || || || || |||| | | ||| | || ||||| | || || || || | | Sbjct 3798403 TTGTC--TTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGG 3798346 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||||||| || | ||||| |||||||| ||||| Sbjct 3798345 TAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||| || || |||||||| || | || ||| | || || Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | || || || ||||||||||| || ||||| || | ||| | || ||||| ||| Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||| || | ||||| ||||| | || || |||| Sbjct 3797938 ATCTTGCTCTTTACATTGT--CGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCT 3797881 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||||||| ||||| |||||||| Sbjct 3797880 TGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 >seq3 Length=4123400 Score = 109 bits (120), Expect = 4e-19 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||| |||||||| ||| ||||| | || | || || || ||||| |||||||| Sbjct 1163296 CCTTTTGAATGTTGTAGTCGCTAAGAGTTCG-GC-CATCCTCGAGTTGCTTTCCGGCAAA 1163239 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263 |||||| || ||||| || | || | |||||||| || ||||| ||| || | Sbjct 1163238 GATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATT 1163179 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | |||||||||| || |||||||| | || || ||||| |||||||||||||| Sbjct 1163178 GT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 1163121 Query 44324 ACGAAG 44329 |||||| Sbjct 1163120 ACGAAG 1163115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989772604231