Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq3 109 4e-19
>seq1
Length=4470873
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| | ||||| || || ||||| ||| ||||| ||||||||||||||
Sbjct 3798308 CATACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATC 3798249
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| || |||| || || ||||| || || |||||||| || |||||||| |
Sbjct 3798248 TGAGAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGG 3798189
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | ||| || || || || || ||||| | | |||||||| | ||||||
Sbjct 3798188 GGGGATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTC 3798129
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || || || ||||| |||||||| || |||||||||||
Sbjct 3798128 GACTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 113 bits (124), Expect = 3e-20
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| | ||||| ||| || ||||| ||||||||||||||||| || | || ||
Sbjct 3798523 AGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTCCGG 3798464
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || |||| |||||| || ||||||||||| ||||| || || | || | ||| |||
Sbjct 3798463 CCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCC 3798404
Query 44240 TTTTCCGTTATCTTCTGCT-TCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCG 44297
|| || || || |||| | | ||| | || ||||| | || || || || | |
Sbjct 3798403 TTGTC--TTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGGG 3798346
Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||||||| || | ||||| |||||||| |||||
Sbjct 3798345 TAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| ||| || || |||||||| || | || ||| | || ||
Sbjct 3798058 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCT 3797999
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| || || || ||||||||||| || ||||| || | ||| | || ||||| |||
Sbjct 3797998 AATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGA 3797939
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| || | ||||| ||||| | || || ||||
Sbjct 3797938 ATCTTGCTCTTTACATTGT--CGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCT 3797881
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || |||||||| ||||| ||||||||
Sbjct 3797880 TGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
>seq3
Length=4123400
Score = 109 bits (120), Expect = 4e-19
Identities = 139/186 (75%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
||||||| |||||||| ||| ||||| | || | || || || ||||| ||||||||
Sbjct 1163296 CCTTTTGAATGTTGTAGTCGCTAAGAGTTCG-GC-CATCCTCGAGTTGCTTTCCGGCAAA 1163239
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263
|||||| || ||||| || | || | |||||||| || ||||| ||| || |
Sbjct 1163238 GATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATT 1163179
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323
|| | |||||||||| || |||||||| | || || ||||| ||||||||||||||
Sbjct 1163178 GT--CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 1163121
Query 44324 ACGAAG 44329
||||||
Sbjct 1163120 ACGAAG 1163115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989772604231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |