Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 1e-31
seq1 149 2e-30
seq4 102 2e-16
>seq3
Length=4123400
Score = 152 bits (168), Expect = 1e-31
Identities = 146/187 (78%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || ||||||||||||||||| || |||||||||
Sbjct 1163116 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1163175
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| ||||||||||| || |||||||||||| |
Sbjct 1163176 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTG 1163235
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
||||| |||||||| || ||||| ||||| | |||||| ||| || ||| | |||||
Sbjct 1163236 ATCTTTGCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAAG 1163295
Query 178110 GAATCAA 178116
| || ||
Sbjct 1163296 GTATGAA 1163302
>seq1
Length=4470873
Score = 149 bits (164), Expect = 2e-30
Identities = 145/187 (78%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| ||||| || ||||| || ||||| ||| | || || ||||| ||||||||
Sbjct 3797644 TCACCGGAAAGACCATCACTCTTGAGGTCGAATCCAGTGATACGATCGACAACGTCAAGT 3797703
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| ||||
Sbjct 3797704 CCAAGATCCAGGACAAGGAAGGAATTCCTCCTGATCAGCAGCGTCTTATCTTCGCAGGAA 3797763
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| || || |||||||| | || || ||| || || |||||||||||||||| || |
Sbjct 3797764 AGCAACTTGAAGATGGCCGCACCCTGAGCGACTACAATATCCAAAAAGAATCAACCCTCC 3797823
Query 178123 ATCTTGT 178129
|||||||
Sbjct 3797824 ATCTTGT 3797830
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || |||||||||||||| ||| || ||
Sbjct 3797853 CAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCTGAT 3797912
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || |||||||||||||| || || || ||||| |||||||||
Sbjct 3797913 ACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAA 3797972
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | |||||||| | |||||| | || || ||| |
Sbjct 3797973 CGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAACATT 3798032
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || || |||||
Sbjct 3798033 CAGAAAGAGTCCACCCTTCACCTTGT 3798058
>seq4
Length=3720747
Score = 102 bits (112), Expect = 2e-16
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| ||||||||||| || ||||||||||| || |||||||||||||| ||||||||
Sbjct 362545 GACAAGGAAGGAATCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGAAAGCAGCTCGAG 362486
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | || || |||| || ||| |||| || || || || || ||||| ||
Sbjct 362485 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCATCTCGT 362430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728994538742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |