Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 seq3 93.3 4e-14 seq2 87.8 2e-12 >seq1 Length=9941542 Score = 136 bits (150), Expect = 3e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| ||||||||| ||||| |||||||||||||||| ||||| ||| ||| Sbjct 2174814 ACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCG 2174873 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| ||| ||||||||||||| ||||||||||| || || |||||||| Sbjct 2174874 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGG 2174933 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | || | ||| || || |||||||| | ||| | || || Sbjct 2174934 ATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTT 2174993 Query 118710 CCGGT 118714 ||||| Sbjct 2174994 CCGGT 2174998 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| ||||| ||||| ||||||||||||||||||| || || || || | Sbjct 2174587 CAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAA 2174646 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | ||||| || || |||| ||||| || || |||||||| ||||| |||||||| || Sbjct 2174647 GTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAA 2174706 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||||| | ||| ||||| | ||| | || |||| Sbjct 2174707 TCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGC 2174766 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| || || || || ||||| Sbjct 2174767 CAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 Score = 104 bits (114), Expect = 2e-17 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||||| ||||||||| | |||||| || || ||||||||||| ||| Sbjct 2174338 TACCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGG 2174397 Query 118570 TCATAGTGCGCGTA--TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | |||| | | || || | ||| || |||||| |||| || || || || ||||| Sbjct 2174398 --AGAGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGG 2174455 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCT 118686 || || |||||||||||| ||| || || || | |||| ||||| | || | | Sbjct 2174456 GGGGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGAT-T 2174514 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || | || | || ||||| || || || || ||||| |||||||| Sbjct 2174515 CCACTTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | ||||| ||||||||| | || ||| || ||||||||||| || Sbjct 2174112 CCACCACGAAGTCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 2174171 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || |||||| | ||| ||||| || |||| | || || || || || || Sbjct 2174172 AGAGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGG 2174231 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||||||| ||| ||| || || | |||| ||| || | |||||| Sbjct 2174232 ATGCCCTCCTTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACT 2174291 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||| ||||| |||| || || || || |||||||| Sbjct 2174292 TCCAGCGTAATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 >seq3 Length=7151654 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||||||||| ||||||| || || ||||||||| ||||| || || |||| Sbjct 5522407 TTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGATC 5522466 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||| || ||||| || || ||||| ||||||||| || || ||| || | ||| Sbjct 5522467 AGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGTCG 5522526 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | || || | ||| ||||||| ||| | || ||||| || || || || || || Sbjct 5522527 ATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 5522585 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTC-TGAGATATACATTCGACGTGAAC 133280 ||||||| ||||| || || || || ||||| |||| |||| || | || || ||| | Sbjct 2824702 GGTTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAG-TAGATGTTGGATGTGTAT 2824760 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 || |||||| ||||||||||||| | ||||||| |||| || ||||||||| || Sbjct 2824761 GGCTCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCA 2824820 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACTT 133369 || | | |||||| | ||||| | ||| Sbjct 2824821 ACGAGGAGAGAGTTGCGAACGCCATGCTT 2824849 >seq2 Length=7897194 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | |||||| ||||||||| || || || Sbjct 2363718 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCG 2363777 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| ||||||||||| ||||| || || || |||||||||| Sbjct 2363778 GCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCCTTCCTTGTCTG 2363823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830373563460