Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=9941542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || ||||| |||||||| ||| || || |||| || || || || || || || Sbjct 2174604 TCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAG 2174663 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || || || || ||||||| || | || ||||||||| ||| | || | |||| | Sbjct 2174664 ATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCC-TGAATCTTGGACTTGACATT 2174722 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || || | ||||| || ||||| || || ||||| || Sbjct 2174723 ATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAAC 2174782 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 2174783 GAAGATTTGCAT 2174794 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 || |||||| |||| ||||||||||| ||||| ||||| |||| ||||| || | || Sbjct 2174126 CAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTACGACCATC 2174185 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | |||||| || || || || | || || ||||| | || | || |||||||| Sbjct 2174186 CTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCCTTGT- 2174244 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| | |||| | ||| | | | || || || || || || | ||| || | Sbjct 2174245 CTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTAATCG 2174304 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || | ||||| || ||||| ||||| Sbjct 2174305 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817564261400