Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 434 9e-117 seq1 140 3e-28 >seq3 Length=7151654 Score = 434 bits (480), Expect = 9e-117 Identities = 1241/1892 (66%), Gaps = 34/1892 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTAT-GGC--GTTTGCGGCCGGTTTGGTGCGAAGATAATACAT 22161 || ||| || || ||||| || ||| | | ||||||| |||| || || || ||||| Sbjct 2824355 CTGGTCGACGGTGAACTGGATAGGCTGGCTGGCGGCCG---TGGTTCGCAGGTAGTACAT 2824411 Query 22162 GCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACT 22221 ||| ||||| |||||||||||||| || ||| || ||||| || | || || | Sbjct 2824412 GCCGGTCTTAAGACCCATCTTCCAGCCGGCAAAGTGCATCGAGGTGATCTTGCCCATGGT 2824471 Query 22222 CGGCAAGTCCATG---TACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATC 22278 || ||| || | | |||| || ||| ||||||||||| || || || || Sbjct 2824472 TGG---GTCTTTGAGATGAATGTTGAGAGATTGAGATTGATCGATAAAGGCACCACGGTC 2824528 Query 22279 GGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCT 22338 || ||||| | | | ||||| |||||||| ||||||||||||| | | Sbjct 2824529 AGCAGCCATCTGCAGGACGTTACGCTGGCTGATTTCCCAGACGGTCTTGTACAAAGCCTT 2824588 Query 22339 GATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398 ||| ||| || || || |||||| || || | | ||||| || Sbjct 2824589 GATGTCTGCGGGAATGTTAGGGACGTTCTGGATTGAACCTCCGTCGGCGATGATACGGTT 2824648 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTC 22456 || || | ||| ||| | ||| | || ||| || || | || ||| |||| Sbjct 2824649 CTTCATGTTGTCGGACCAAAGACCAAGATCGACCAAGTCCTTCAGCAACCATG--GGTTG 2824706 Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || ||||| || || || | || || || ||| ||| |||||||||||| | || ||| Sbjct 2824707 ACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTATGGCTCG 2824766 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 ||| |||| ||||| |||| ||||| | ||||| || || ||||| || || | || Sbjct 2824767 AAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCAACGAGG 2824826 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGA 22636 || ||||| | | ||| ||||||| ||||| | ||| ||| ||||||||| || Sbjct 2824827 AGAGAGTTGCGAACGCCATGCTTTGCAATTTCAGCCTTCAGCGAGTCCCAGTCCCAAAGG 2824886 Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTG 22696 |||| || ||||| || ||||||||| ||||| | | ||| || | ||||| Sbjct 2824887 TCGGTGGGAGTCACGTT---CCACATATCATATTGGAGGATGCCCTGAGAAACTGGGCTA 2824943 Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756 || |||||||| | || || || | | ||||| || || || | || Sbjct 2824944 CCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATGAAGCTGTAAGGGCA 2825003 Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTAC 22816 | | || || ||||||||||| | |||| | || | ||| || ||| | Sbjct 2825004 GCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCTTCGGGAGATTCAAAA 2825063 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 |||| ||| | | ||| || || |||| |||||| || || | ||| || |||| | Sbjct 2825064 GGCAAACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGGACACCCAAACCAATGGGTCTG 2825123 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | | || || || ||||| || | ||| || | || ||||| | || Sbjct 2825124 TGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGTTGACGTCGATGATCTTG 2825183 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC- 22995 ||||| || | || || | | || | ||||||| || |||| Sbjct 2825184 TTCAAATTGCGAGTGACGACCTGGGTCACTTCGTGGAGACGACCAAAGTCATACTCGCCG 2825243 Query 22996 CGAT--TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCG 23053 ||| || | ||||| | | || | || ||||| ||||| || || ||||| Sbjct 2825244 CGAGCCTGGTCGACAAAGCTCGGCAGAGCCAATGATGCAAGGTTGCACACAGCGACCTCA 2825303 Query 23054 TCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAA 23113 || || |||||||| |||||||| || || || ||| | ||||| |||| Sbjct 2825304 TCAGGGGCAGTGTACTCGACAATTTCTGTGCAAAGGTTGGAGCTGCGGATCGTTCCCAGG 2825363 Query 23114 TTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTC 23173 || | |||||||| |||| ||||||| ||||||||||||||||||||| |||| ||| Sbjct 2825364 TTCTTTTGGTTGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTACGGGTTGCCAGTC 2825423 Query 23174 TCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC 23233 ||| ||| | ||||| || || ||||| |||| || | | || | ||| | Sbjct 2825424 TCGGTCTGTGCCTCGAGAATGGCATACCACAGTTTCTGGGCCTTGATG-GTTGAACGACC 2825482 Query 23234 -CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGG 23291 | ||| || | ||||| | ||| | || || ||||| | || || ||| |||| Sbjct 2825483 ACGGCCCTCCTTTTCGTAGCGCTCGTATAGAGCCTCGAATTCCTCGCCATAGACA-TCGG 2825541 Query 23292 CCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGT 23350 | ||||| || | | ||| || || | ||| |||| | || || || || ||| Sbjct 2825542 CAAGGCCAGGAGCCT-CATGAGGGCAGAAGAGTGTCCAGTCTTGGTTCTTCTCGACACGT 2825600 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 ||| || |||||||| ||||||| ||||||||||| || || || || ||||||||| Sbjct 2825601 TGCATGAACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAGCACGGACCTCCTCT 2825660 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 || ||| ||||||| ||| | | || || || || || || ||||| ||||||||| Sbjct 2825661 TTTCCGTGGTTCTTTCTCAGGTTGAGGAACTCGAAGACATCTGCGTGCCATGGCTCGAGG 2825720 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 || | |||||| || || |||| ||| ||||| || || || || || ||||| |||||| Sbjct 2825721 TAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAACATAGCGGGCAGTGTTG 2825780 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 ||| | || | ||||| || | ||| || ||||| | ||| || || | | Sbjct 2825781 TTGAAGACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGTTCCGGCGATATAA 2825840 Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650 || || | || |||| | |||| | | || ||| ||||| ||| | | || || ||| Sbjct 2825841 GAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCGATGCCGCCGGCAGTCTTGGAGATC 2825900 Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACC 23710 || || ||| || || ||||||||||||||||| ||||| || || || | ||| | Sbjct 2825901 ATTGCACATGTCTTGAGTGTGTCGTAGATGCCCTCAATGCTATCTTCCTTCATATCGATC 2825960 Query 23711 AAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770 ||||| || || |||| || |||| || || |||| ||||| || || || Sbjct 2825961 AAGAAGCAGGATGACAACTGAGCTTGAGGTGTGCCGGCGTTGAACAACGTGGGCGACGCA 2826020 Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCT 23830 || |||||| || | ||||| || ||||| || | ||||| |||| ||| ||| Sbjct 2826021 TGAGTAAAGCATTTCTGGGACATGAGGTTGTATGTCTGAATGGCCTTCTCAACGTCGTCT 2826080 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TC-TCGACCGTGACG 23887 ||||| || || | | || ||||| | ||||| || |||| || |||| | Sbjct 2826081 CCGTGAATGCCAACAGACACACGCATAAGCATGTGCTGTGGTCGTTCAGCGACTTGCTTG 2826140 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 ||| || |||| || ||||| | || || ||| || || || || || | ||||| Sbjct 2826141 CCG---ATCTTGAGGAGGTATGATCTTTCCAACGTCTTGAAGCCGAAGTATTGGTAGTTG 2826197 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 ||||| || |||| || |||||||| ||||| Sbjct 2826198 AAGTCTCGGTCGTAGACAATGGCCGAGTTCAA 2826229 >seq1 Length=9941542 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || |||||| | || ||||| | | Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || ||||||||||||| | || |||||||| Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAA 2174675 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || |||||||| || || |||||||| | |||||| || |||||||||| ||| Sbjct 2174674 CAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGCGATTACAAC 2174615 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| |||||||| || || ||||| || || Sbjct 2174614 ATTCAGAAAGAATCTACCCTCCATCTTGTCCT 2174583 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || ||||| | || || ||| | || Sbjct 2174566 ATGCAGATCTTTGTCAAGACCCTTACGGGCAAGACCATCACACTAGAAGTGGAATCATCA 2174507 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||| || | || |||||||| Sbjct 2174506 GACACGATCGACAACGTCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCAA 2174447 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || ||||||||||| |||||||||||| | || | ||| || ||| Sbjct 2174446 CAACGACTGATCTTCGCTGGCAAGCAGTTGGAAGACGGAAGAACACTCTCCGACTACAAC 2174387 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || || |||| || |||||| | || |||| Sbjct 2174386 ATTCAGAAGGAATCTACACTACACTTGGTGCTGAGACTGCGAGGTGGTA 2174338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766372139600