Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 201 1e-46 seq1 114 2e-20 >seq3 Length=7151654 Score = 201 bits (222), Expect = 1e-46 Identities = 738/1142 (65%), Gaps = 18/1142 (2%) Strand=Plus/Plus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 ||||| || || || || || ||||||| || | | || | | || || |||||| Sbjct 2825277 GATGCAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGCAA 2825336 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 || || | ||| ||||| | || | ||| || |||||| |||| ||||||||| Sbjct 2825337 AGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCC 2825396 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921 || || || ||| | || | ||||| || |||| | || | ||| || | ||| | | Sbjct 2825397 TTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACA-G 2825455 Query 65922 ACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTATAGT--GTATACA 65976 || | ||||| || | || | | | ||| ||||||| | ||||| | Sbjct 2825456 TTTCTGGGCCTTGATGGTTGAACG--ACCACGGCCCTCCTTTTCGTAGCGCTCGTATAGA 2825513 Query 65977 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 66036 | ||||| || || || | |||| | | | |||||| |||| || || | | Sbjct 2825514 GCC--TCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAGAAGA 2825571 Query 66037 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 66096 | ||| ||| || | || || |||| ||| || ||||| ||| |||| || || Sbjct 2825572 GTGTCCAGTCTTGGTTCTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGT 2825631 Query 66097 TAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156 || | || | | | ||||| ||||| |||||| | || | ||||||| Sbjct 2825632 AGAACAGGTCACGAGCACGGACCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTGAGGAACT 2825691 Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216 | | | ||| ||||| || || | ||| ||||| | | | || || || ||||| | Sbjct 2825692 CGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGC 2825751 Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276 | || || || | || | || ||||| || | || | | ||| ||||| | |||| Sbjct 2825752 CACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCAT 2825811 Query 66277 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGA 66334 |||| || |||||||| |||| |||||| ||| | |||||||| | | ||||| Sbjct 2825812 TGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGA 2825871 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 |||| || || || || | || ||||| | ||| ||| || | || || ||||| Sbjct 2825872 --GACCGATGCCGCCGGCAGTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGTAGAT 2825929 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454 |||||| || ||||| ||| |||| | | | || ||| |||| || || Sbjct 2825930 GCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGG 2825989 Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 || || || || || || || || || || || ||||| ||||| | || | || || Sbjct 2825990 TGTGCCGGCGTTGAACAACGTGGGCGACGCATGAGTAAAGCATTTCTGGGACATGAGGTT 2826049 Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574 ||| |||| ||| || || | || | ||||| || || | |||||||| | Sbjct 2826050 GTATGTCTGAATGGCCTTCTCAACGTCGTCTCCGTGAATGCCAACAGACACACGCATAAG 2826109 Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCA 66633 ||||||||| |||| |||| ||| |||| ||| || || | | ||| ||| |||||| Sbjct 2826110 CATGTGCTGTGGTCGTTCAGCGA-CTTGCTTGCCGATCTTGAGGAGGTATGATCTTTCCA 2826168 Query 66634 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 66693 | || || || || || || | ||| |||||||| ||||| | ||| ||||||| | Sbjct 2826169 ACGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATGGCCGAGTTCA 2826228 Query 66694 GTTTATCCTTATATTTGTTAACTACATCCAT-GGTAATACTTGAAATAATCGGAGAATGT 66752 | ||| || ||| | || |||| ||| || ||||||| || || ||| | Sbjct 2826229 ACTCATCGGCATGTTTCATCAC-ACATTCATACGTCTCCTTTGAAATCATAGGGGAAGGC 2826287 Query 66753 TTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 66812 || || || || |||||||||| | | | ||| | || ||| |||| Sbjct 2826288 TTGTTGTTCTTGGGGTTGACATAGTAGTAAAGATCTGAGACGACGGAGGAGAATTGTTTC 2826347 Query 66813 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGA 66872 || |||| ||||| || || || ||||| || | || |||| |||||||| || ||| Sbjct 2826348 TTGGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCTGCTAGGATGGCATAGTCGGGA 2826407 Query 66873 TG 66874 || Sbjct 2826408 TG 2826409 >seq1 Length=9941542 Score = 114 bits (126), Expect = 2e-20 Identities = 180/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || ||||| || ||||| || || |||||||| ||||| || ||||| || || || || Sbjct 8816714 TTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCAGCGAAC 8816655 Query 36299 GCAATAAGTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTTTTGAGCCCAATCG 36355 |||| |||||||| | | || | ||||| ||||| | | ||||| || Sbjct 8816654 GCAACAAGTCTCTGGGCGAAGGAGGAATCTTTGTCAGAGATCCATGTCAGGGCCCAGTCT 8816595 Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415 ||||||||| | ||||| || || || || |||| || | ||| | || | || Sbjct 8816594 GCCTTCTTTCGGATGCAAGGGATGGTGTCAATGGCATCGAACAAATAAGTCTTCTGCTTG 8816535 Query 36416 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 36475 | ||||| | |||||||| ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 8816534 TTGTCTTTGATGTATGTATCGATCAACAGACTGTACATCTCGGAATGGATGTTTTCAATC 8816475 Query 36476 GCCATTTGAAATCCGTA 36492 ||||| || | ||| Sbjct 8816474 ATGATTTGGAAACTGTA 8816458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172758864200