Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 226 4e-54 seq1 123 4e-23 >seq3 Length=7151654 Score = 226 bits (250), Expect = 4e-54 Identities = 1102/1723 (64%), Gaps = 34/1723 (2%) Strand=Plus/Plus Query 79051 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAT 79110 || || || ||||| |||||||||| || || | || | ||| || || || ||| Sbjct 2824701 GGGTTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTAT 2824760 Query 79111 GGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCC 79170 || || | |||| || || |||||||| || | || ||||| || ||||| || || Sbjct 2824761 GGCTCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCA 2824820 Query 79171 ACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAAT 79228 || | | | || | || || ||| | || |||| | | || || || ||||| | Sbjct 2824821 ACGAGGAGAGAGTTGCGAACGCC--ATGCTTTGCAATTTCAGCCTTCAGCGAGTCCCAGT 2824878 Query 79229 CCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGT 79288 ||||||| || | || || ||||| | ||||||||| || || || | | | | | Sbjct 2824879 CCCAAAGGTCGGTGGGAGTCACGTTCCACATATCATATTGGAGGATGCCCTGAGAAAC-T 2824937 Query 79289 ATGATCCTGT-GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCT 79347 | | | | ||| || | ||| ||||||| || | || | ||||| || | | Sbjct 2824938 GGGCTACCCTCGTACGTCTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATGAAGC-TGT 2824996 Query 79348 AATG-CTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCT 79406 || | | | | |||||||| ||||| |||| | ||||| | | ||||| | Sbjct 2824997 AAGGGCAGCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCTTCGGGAGA 2825056 Query 79407 ATCAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 79465 ||||| || || | || || ||| || || || | || || ||||| | ||| | Sbjct 2825057 TTCAAAAGGCAAACGGAGAGCGAGGAAA-GCATCAGCCAGACCCTGGACACCCAAACCAA 2825115 Query 79466 TAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 79525 | ||||| |||| | | || | | || || |||| ||| || || || | || | Sbjct 2825116 TGGGTCTGTGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGTTGACGTCGA 2825175 Query 79526 TAATTTTATTGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA 79584 | || || || | ||| | || | | || | | ||| || | || ||| ||| Sbjct 2825176 TGATCTTGTTCAAATTGC-GAGTGACGACCTGGGTCACTTCGTGGAGACGACCAAAGTCA 2825234 Query 79585 AA-TCGTCCAT---CTATT--ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACG 79638 | ||| | || | ||||| | || || | ||||| || || || || Sbjct 2825235 TACTCGCCGCGAGCCTGGTCGACAAAGCTCGGCAGAGCCAATGATGCAAGGTTGCACACA 2825294 Query 79639 GCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATG 79698 || ||||||| || | | || | | ||||| ||||| ||||| | || Sbjct 2825295 GCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGCAAAGGTTGGAGCTGCGGATC 2825354 Query 79699 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGA 79758 ||||| | || | ||| || |||||| |||| ||||||||||| || || ||| |||| Sbjct 2825355 GTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTACGGG 2825414 Query 79759 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTAT 79817 | ||||| || |||| | || | ||| || | ||| | | || | ||||| || | Sbjct 2825415 TTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACA-GTTTCTGGGCCTTGATGGT 2825473 Query 79818 AGA-CTTGTATCTCTTTTCTCTTTCGTATTGT--GTATATAATCGTTCGAACTCGTCTCC 79874 || | | | | || ||||||| | ||||| | | ||||| || || || Sbjct 2825474 TGAACGACCACGGCCCTCCT-TTTCGTAGCGCTCGTATAGAGCC--TCGAATTCCTCGCC 2825530 Query 79875 CCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATC 79934 | |||||| | | |||||| || | ||| || | | | ||| ||| | | Sbjct 2825531 ATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAGAAGAGTGTCCAGTCTTGGTTCTT 2825590 Query 79935 CTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 79994 || || |||| ||| || ||||| ||| |||| || || || || || | | | Sbjct 2825591 CTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAGCACG 2825650 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 |||||| ||||| |||||| | || | ||||||| | | | ||| | ||||| Sbjct 2825651 GACCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTGAGGAACTCGAAGACATCTGCGTGCCA 2825710 Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114 || || | ||| ||||| | | | || ||||| ||||| || || || || | || | Sbjct 2825711 TGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAACATAGCG 2825770 Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 || ||||| || | || | | ||| ||||| | |||||||| || |||||||| || Sbjct 2825771 GGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATTGGTTCC 2825830 Query 80175 GGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCC 80232 || |||||| ||| | |||||||| | | ||||| |||| || || || || Sbjct 2825831 GGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCGATGCCGCCGGCA 2825888 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 | || ||||| | ||| ||| || | || || ||||||||||| |||||||| || Sbjct 2825889 GTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGTAGATGCCCTCAATGCTATCTTCC 2825948 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 80352 |||| | | | || ||| |||| || || || || || || || || Sbjct 2825949 TTCATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGGTGTGCCGGCGTTGAACAAC 2826008 Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 || || || || || ||||| ||||| | |||| || ||||| |||| ||| || Sbjct 2826009 GTGGGCGACGCATGAGTAAAGCATTTCTGGGACATGAGGTTGTATGTCTGAATGGCCTTC 2826068 Query 80413 TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 || | || | ||||| || || | |||||||| | ||||||||| |||| |||| Sbjct 2826069 TCAACGTCGTCTCCGTGAATGCCAACAGACACACGCATAAGCATGTGCTGTGGTCGTTCA 2826128 Query 80473 ACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATA 80531 ||| |||| || || || | | ||| ||| ||||||| || || || || || || Sbjct 2826129 GCGA-CTTGCTTGCCGATCTTGAGGAGGTATGATCTTTCCAACGTCTTGAAGCCGAAGTA 2826187 Query 80532 GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTT 80591 | ||| |||||||| ||||| | ||| ||||||| | | ||| || ||| | Sbjct 2826188 TTGGTAGTTGAAGTCTCGGTCGTAGACAATGGCCGAGTTCAACTCATCGGCATGTTTCAT 2826247 Query 80592 AACTACATCCAT-GGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 80650 || |||| ||| || ||||||| || || ||| | || || || || || | Sbjct 2826248 CAC-ACATTCATACGTCTCCTTTGAAATCATAGGGGAAGGCTTGTTGTTCTTGGGGTTGA 2826306 Query 80651 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 80710 |||||| | | | ||| | || ||| |||| || |||| |||||| || | Sbjct 2826307 CATAGTAGTAAAGATCTGAGACGACGGAGGAGAATTGTTTCTTGGTTTGCTTGTGGAGGT 2826366 Query 80711 TTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | || ||||| || | || |||| |||||||| || ||||| Sbjct 2826367 TGGACACGGCAATACGTGCTGCTAGGATGGCATAGTCGGGATG 2826409 >seq1 Length=9941542 Score = 123 bits (136), Expect = 4e-23 Identities = 171/239 (72%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || ||||| || ||||| || || || ||||| |||||||| ||||| || || || || Sbjct 8816714 TTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCAGCGAAC 8816655 Query 50101 GCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 50157 ||||||||||||| | | || | ||||| ||||| | | ||||| || Sbjct 8816654 GCAACAAGTCTCTGGGCGAAGGAGGAATCTTTGTCAGAGATCCATGTCAGGGCCCAGTCT 8816595 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217 ||||||||| | ||||| || || || ||||||| || | ||| | || | || Sbjct 8816594 GCCTTCTTTCGGATGCAAGGGATGGTGTCAATGGCATCGAACAAATAAGTCTTCTGCTTG 8816535 Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 50276 | ||||| | || ||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 8816534 TTGTCTTTGATGTATGTATCGATCAACAGACTGTACATCTCGGAATGGATGTTTTCAAT 8816476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268755108200