Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 123 4e-23 seq1 87.8 3e-12 >seq3 Length=7151654 Score = 123 bits (136), Expect = 4e-23 Identities = 382/582 (66%), Gaps = 12/582 (2%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864 ||| || |||| ||| |||||| | || |||||| | | | ||| || || | | Sbjct 2825828 AACCAATGGCACTTCCAATGGCCTCATTCCTATGCTCCGGGTCTTCAACAACACTGCC-C 2825770 Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 | || ||| || || ||||| || || || || ||| | ||| ||||| | || || | Sbjct 2825769 GCTATGTTGACCAAGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCAT 2825710 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| || || || || || || | || | || ||| || || |||| | Sbjct 2825709 GGCACGCAGATGTCTTCGAGTTCCTCAACCTGAGAAAGAACCACGGAAAAGAGGAGGTCC 2825650 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---A 97041 | || | ||| |||| || ||||| ||| || ||| |||||||| | || ||| | Sbjct 2825649 GTGCTCGTGACCTGTTCTACGCACTATGGACTCCGGATCTGTTCATGCAACGTGTCGAGA 2825590 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | || | |||||| || | ||||| | | | || || || ||||| || Sbjct 2825589 AGAACCAAG---ACTGGACACTCTTCTGCCCTCATGAGGCTCCTGGCCTTGCCGATGTCT 2825533 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGA 97160 ||||| || || ||||| ||| | |||||| | |||||||| ||| | Sbjct 2825532 ATGGCGAGGAATTCGAGGCTCTATACGAGCGCTACGAAAAGGAGGGCCGTGGTCGTTCAA 2825473 Query 97161 CGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 | | || | || | |||||||| | ||||| | ||| ||| |||||||| | Sbjct 2825472 CCA-TCAAGGCCCAGAAACTGTGGTATGCCATTCTCGAGGCACAGACCGAGACTGGCAAC 2825414 Query 97221 CCGTACATTCTCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCAC 97279 |||||||| |||||||||||| |||| || | || ||||||||| || |||| || Sbjct 2825413 CCGTACATGCTCTACAAGGAT-GCGTGCAACAGAAAGAGCAACCAAAAGAACCTGGGAAC 2825355 Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339 ||| ||||||| || ||||| |||||||| |||||| | | || || ||| || Sbjct 2825354 GATCCGCAGCTCCAACCTTTGCACAGAAATTGTCGAGTACACTGCCCCTGATGAGGTCGC 2825295 Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 || ||| || ||||| | |||||| | ||||| || Sbjct 2825294 TGTGTGCAACCTTGCATCATTGGCTCTGCCGAGCTTTGTCGA 2825253 >seq1 Length=9941542 Score = 87.8 bits (96), Expect = 3e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 125046 GCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACT 125105 || || || ||||| | |||||||| ||||| |||||||| || |||| ||| | | Sbjct 8816211 GCGTCATTCTGGACAGCTGAAGAGGTTGATCTCTCCAAGGATCTTCACGACTGGCACAAC 8816270 Query 125106 CGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCC 125165 ||||||| || ||| || | || || || || | | ||||||||||| | ||| Sbjct 8816271 CGTTTGAACGATGACGAGAGATACTTCATTTCTCATGTCCTTGCCTTCTTTGCTGCTTCC 8816330 Query 125166 GATGGAATCGTCAACGACAATCT 125188 ||||| ||||||||||| ||||| Sbjct 8816331 GATGGTATCGTCAACGAAAATCT 8816353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059153683800