Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=9941542 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| ||||| || ||||| || |||||||||||||| || ||| ||||||| | ||| Sbjct 2174591 ATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTG 2174650 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 |||||| || | || | ||||||||||||| ||||| ||||| ||||| ||| || Sbjct 2174651 TTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTT 2174710 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || || || ||||| || || || ||||| || || || || || Sbjct 2174711 GGACTTGACATTATCGATAGTGTCGCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGT 2174770 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || ||||||||| Sbjct 2174771 AAGAGTCTTAACGAAGATTTGCATA 2174795 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| || ||| | || || || || || || || || || |||||||| ||| Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGGAG 2174399 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||| || || ||||||||| | |||| |||||||||||| || Sbjct 2174400 AGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGGGG 2174459 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || ||||| ||| || ||| || | || || || || ||| || Sbjct 2174460 ATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCACT 2174519 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| || ||||| || || || || || || ||||| || |||||| Sbjct 2174520 TCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCATA 2174567 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || || || || ||||| |||||||||||||| || | | | ||||| Sbjct 2174814 ACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTGCGGCCATCTTCG 2174873 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | || | ||| ||||| ||| ||||||||||| ||||| Sbjct 2174874 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGG 2174933 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || || || | || ||||||||||| ||| || || | ||| ||||| || Sbjct 2174934 ATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACCTCAAGGGTGATGGTCTTT 2174993 Query 15335 CCTGT 15339 || || Sbjct 2174994 CCGGT 2174998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179177929705