Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 >seq1 Length=9941542 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||| || || | ||| |||||||||| || | || || || ||||| ||| Sbjct 2174598 GTAGATTCTTTCTGAATGTTGTAATCGCTCAGGGTTCGGCCGTCTTCAAGTTGTTTGCCG 2174657 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||||| | ||| || || |||||||| ||||| ||||| | ||| || | |||| Sbjct 2174658 GCAAAGATTAGACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTG 2174717 Query 94931 ACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || ||| |||||| || || || || || | ||||| || || ||||||||||| Sbjct 2174718 ACATTATCGATAGTGTC-GCTTGACTCAACCTCCAAGGTGATAGTCTTGCCAGTAAGAGT 2174776 Query 94990 TTTCACAAAGATCTGCAT 95007 || || ||||| ||||| Sbjct 2174777 CTTAACGAAGATTTGCAT 2174794 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || || ||||||||| | ||||||||||| || | ||| || ||| Sbjct 2174340 CCACCTCGCAGTCTCAGCACCAAGTGTAGTGTAGATTCCTTCTGAATGTTGTAGTCGG-- 2174397 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | |||||| || |||| ||| || || | ||||| | || ||| || || || | Sbjct 2174398 AGAGTGTTCTTCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGGG 2174457 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | ||||| || ||||| | ||| || | ||||||| | ||| ||||| | || | Sbjct 2174458 GGATACCCTCCTTGTCTTGAATCTTAGACTTGACGTTGTCGATCGTGTCTGATGATTCCA 2174517 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || || ||||| || || |||||||||||||| Sbjct 2174518 CTTCTAGTGTGATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 2174566 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || || ||||||||||| ||| ||||| || | ||| || || | || || || Sbjct 2174123 TCTCAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAG--AAAGAGTACGA 2174180 Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 |||||||| ||| |||||| ||||||| || | ||| || || || || || || || Sbjct 2174181 CCATCCTCCAACTGCTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGGGGGATGCCCTCC 2174240 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | ||| |||| ||| ||| | ||| || |||| ||||| || | ||| Sbjct 2174241 TTGTCTTGAATCTTTGACTTCACGTTGTCGATGGTATCAGAAGACTCGACTTCCAGCGTA 2174300 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| | || || || ||||||||||| Sbjct 2174301 ATCGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 2174338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291171981800