Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 165 1e-36 >seq3 Length=7151654 Score = 165 bits (182), Expect = 1e-36 Identities = 163/208 (78%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||| |||||| || |||||||| || ||||||||||| || | Sbjct 5998460 CGCCAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCTGCCA 5998402 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 5998401 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCTATGATCTACGAAGAGA 5998342 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | ||| | ||| ||||||| | |||| || | ||||||| || ||| || | Sbjct 5998341 CTCGCGGTGTCCTCAAGTCCTTCCTCGAATCCGTCATTCGTGATGCTGTCACCTACACTG 5998282 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTC 16638 ||||||| || | ||||||||||| || Sbjct 5998281 AGCACGCAAAGAGAAAGACTGTCACATC 5998254 Score = 143 bits (158), Expect = 4e-30 Identities = 143/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||||| | || || ||||||||||| ||||||||||| ||||| Sbjct 3215205 GCCAAGCGCCACCGAAAGATCT-TGCGTGACAACATCCAAGGTATCACCAAGCCCGCTAT 3215263 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 3215264 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 3215323 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| ||||||| |||||| || || |||| ||||||| || || || || Sbjct 3215324 CCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATGCTGTCACATACACTGA 3215383 Query 16612 GCA 16614 ||| Sbjct 3215384 GCA 3215386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075195428465