Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq3 109 5e-19 seq2 89.7 5e-13 >seq1 Length=9941542 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | || ||||||||||| ||||||||||||||| Sbjct 2174796 CCACCACGGAGACGAAGGACCAAATGGAGTGTAGACTCCTTTTGGATGTTGTAATCGCTC 2174855 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||| || || ||||| Sbjct 2174856 AGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGA 2174915 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || |||| | || | |||||| |||| |||| Sbjct 2174916 ATTCCTTCCTTGTCCTGGATCTTAGATTTGACGTTGTCAATGGTATCGCTGGATTCGACC 2174975 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 2174976 TCAAGGGTGATGGTCTTTCCGGT 2174998 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| || || || |||||||||||||||||| Sbjct 2174568 CCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCTTTCTGAATGTTGTAATCGCTC 2174627 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || || ||||| || |||||| ||| || ||||| ||||| Sbjct 2174628 AGGGTTCGGCCGTCTTCAAGTTGTTTGCCGGCAAAGATTAGACGTTGTTGGTCGGGAGGA 2174687 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||| ||| | ||||| | Sbjct 2174688 ATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTATCGATAGTGTCGCTTGACTCAACC 2174747 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || ||||| || ||||| Sbjct 2174748 TCCAAGGTGATAGTCTTGCCAGTAAGAGTCTTAACGAAGATTTGCAT 2174794 >seq3 Length=7151654 Score = 109 bits (120), Expect = 5e-19 Identities = 917/1468 (62%), Gaps = 49/1468 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || || || || |||| ||||| || | || | ||| || ||| | || Sbjct 2824704 TTGACGACTTGGAATTCTCCAGCCAGAACACGTCGTGAGTAGATGTTGGATGTGTATGGC 2824763 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| | ||||| ||||||| || || | |||| ||| ||||||||| || || Sbjct 2824764 TCGAAACATTCGTTGTTGCCCAAAATCTGCGATGTCGATGCAGTGGGCATGGGAGCAACG 2824823 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||| ||||| || || |||| |||| |||| ||||| Sbjct 2824824 AGGAGAGAGTTGCGAACGCCATGCTTTGCAATTTCAGCCTTCAGCGAGTCCCAGTCCCAA 2824883 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || |||||| |||||| || || || | ||||||| | ||||| Sbjct 2824884 AGGTCGGTGGGAGTCACGTTCCACATATCATATTGGAGGATGCCCTGAGAAACTGGGCTA 2824943 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTCCAGAGC 145356 || | | | ||| | | || | || || ||||| || || || || Sbjct 2824944 CCCTCGTACGT-CTGATAGGGTCCTTGCTCCTGTGCAAGCTCACATGAAGCTGTAAGGGC 2825002 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 | ||||| |||||| || || ||||||| | ||||| || | Sbjct 2825003 AGCATGGTAAATGGTCTCGAAGATCTGAATGTTGAGTTGGCGGGCTTCGGGAGATTCAAA 2825062 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 |||| || || | |||||||| || || ||||| | |||| || ||||| | Sbjct 2825063 AGGCAAACGGAGAGCGAGGAAAGCATCAGCCAGACCCTGGACACCCAAACCAATGGGTCT 2825122 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAATTT 145535 ||| ||||||||| || ||||| | ||| || | | | ||| ||||| || | Sbjct 2825123 GTGTCGCATGTTGCTGTTCTTCGCCTCAGGAACAGGGTAGTAGTTGACG-TCGATGATCT 2825181 Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAAT---GTGCCG-CAACTTTTCAAAGTCAAAC 145591 | ||||| || || || |||| || | ||| | | || |||||||| || Sbjct 2825182 TGTTCAAATTGCGAGTGACGACCTGGGTCACTTCGTGGAGACGAC----CAAAGTCATAC 2825237 Query 145592 ------CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAA 145645 ||||||| ||| || | |||| | || | || || | || || Sbjct 2825238 TCGCCGCGAGCCTGGTCGACAA------AGCTCGGCAGAGCCAATGATGCAAGGTTGCAC 2825291 Query 145646 ACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705 || || ||| || | | | |||| | || || || | ||| | ||| | | Sbjct 2825292 ACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGCAAAGGTTGGAGCTGCGG 2825351 Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765 || |||||||| || | || || || || ||||||||||| |||||||||||||||||| Sbjct 2825352 ATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCCTTGTAGAGCATGTAC 2825411 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACC 145825 || ||||||||| ||| | ||| | || | || | ||| || | Sbjct 2825412 GGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACAGTTTCTGGGC-----CT 2825466 Query 145826 TGCTGCTGGTAG-----CGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 || || | | | |||||||| | |||||| | ||| || |||| || | Sbjct 2825467 TGATGGTTGAACGACCACGGCCCTCCTTTTCGTAGCGCTCGTATAGAGCCTCGAATTCCT 2825526 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 || ||| ||||| ||||| ||| || | || || | || | ||| | || Sbjct 2825527 CGCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAGAAGAGTGTCCAGTCTTGGT 2825586 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000 | | ||| || | ||| |||| ||| || ||| || ||||| | || ||| || | Sbjct 2825587 TCTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGTAGAACAGGTCACGAG 2825646 Query 146001 CTTTGCAATCCTCAGCACCCATGTTTCGCT-TCAAATTAAGCACACTATA-GATGTCCGC 146058 | | ||||| || || ||| | ||| || || | ||| | || || || Sbjct 2825647 CACGGACCTCCTCTTTTCCG-TGGTTCTTTCTCAGGTTGAGGA-ACTCGAAGACATCTGC 2825704 Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCAC 146115 |||||| || || | |||| ||| | || || ||| ||| ||||| ||||| || Sbjct 2825705 GTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCTTGGTCAAC 2825764 Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175 | || | ||||||| ||||| || | ||| || || ||| ||| ||| || Sbjct 2825765 ATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCATTGGAAGTGCCATT 2825824 Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235 || | || | ||| | || | ||| ||| |||| | |||| ||||| Sbjct 2825825 GGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCGATGCCGCC 2825884 Query 146236 GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTAT 146294 | | |||||| || || || ||| ||| || ||||||||||| |||||||||| Sbjct 2825885 GGCAGTCTTGGAGATCATTGCACATGTCTT-GAGTGTGTCGTAGATGCCCTCAATGCTAT 2825943 Query 146295 C--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGA 146352 | |||| || ||| || ||||| || ||| ||| || || || || || Sbjct 2825944 CTTCCTTC--ATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGGTGTGCCGGCGTT 2826001 Query 146353 GAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTTCGA 146411 ||||||||| || ||| || ||||| ||||| | || ||| | || || | | Sbjct 2826002 GAACAACGTGGGCGACGCATGAGTAAAGCATTTCT-GGGACATGAGGTTGTATGTCTGAA 2826060 Query 146412 TAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGG 146471 | || | | || |||||| || |||||||| | || || ||||| |||||||| || | Sbjct 2826061 TGGCCTTCTCAACGTCGTCTCCGTGAATGCCAACAGACACACGCATAAGCATGTGCTGTG 2826120 Query 146472 GCCGCTCCGCCACTTGATTGTCAATCTT 146499 | || || || ||||| ||| | ||||| Sbjct 2826121 GTCGTTCAGCGACTTGCTTGCCGATCTT 2826148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||||||| ||| || ||||| || || ||||| || ||| Sbjct 5522405 CCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCCTCGAGTTGTTTGCCGGCAAAGA 5522464 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||| || || || || || || ||||| ||||| ||| || |||| | | Sbjct 5522465 TCAGACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGGATCTTGGATTTGACGTTGT 5522524 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | |||||||| ||||| | |||| ||| | || || || || || || || |||| Sbjct 5522525 CGATAGTATCGGAAGACTCTACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 5522584 Query 131225 A 131225 | Sbjct 5522585 A 5522585 >seq2 Length=7897194 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| | ||||| ||||| || |||||||| Sbjct 2363718 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGTTGCTTGCCG 2363777 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||| | |||||||||||| || || |||||||| ||||| Sbjct 2363778 GCGAAGATCAGACGCTGCTGGTCGGGCGGAATTCCTTCCTTGTC 2363821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012770499200