Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 219 5e-52 seq1 114 2e-20 >seq3 Length=7151654 Score = 219 bits (242), Expect = 5e-52 Identities = 742/1142 (65%), Gaps = 18/1142 (2%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 ||||| || || || || || ||||||| || | | || | | || || |||||| Sbjct 2825277 GATGCAAGGTTGCACACAGCGACCTCATCAGGGGCAGTGTACTCGACAATTTCTGTGCAA 2825336 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 || || | ||| ||||| | || | ||| || |||||| |||| ||||||||| Sbjct 2825337 AGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTTTGGTTGCTCTTTCTGTTGCACGCATCC 2825396 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 || || || ||| | || | ||||| || |||| | || | ||| || | ||| | | Sbjct 2825397 TTGTAGAGCATGTACGGGTTGCCAGTCTCGGTCTGTGCCTCGAGAATGGCATACCACA-G 2825455 Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTC--TTTCGTATAGT--GTATACA 62987 || | ||||| || | || | | | ||| ||||||| | ||||| | Sbjct 2825456 TTTCTGGGCCTTGATGGTTGAACG--ACCACGGCCCTCCTTTTCGTAGCGCTCGTATAGA 2825513 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 | ||||| || || || | |||| | | || |||||| |||| || || | | Sbjct 2825514 GCC--TCGAATTCCTCGCCATAGACATCGGCAAGGCCAGGAGCCTCATGAGGGCAGAAGA 2825571 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107 | ||| ||| || | || || |||| ||| || ||||| ||| |||| || || Sbjct 2825572 GTGTCCAGTCTTGGTTCTTCTCGACACGTTGCATGAACAGATCCGGAGTCCATAGTGCGT 2825631 Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167 || || || | | | ||||| ||||| |||||| | || | ||||||| Sbjct 2825632 AGAACAGGTCACGAGCACGGACCTCCTCTTTTCCGTGGTTCTTTCTCAGGTTGAGGAACT 2825691 Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227 | | | ||| | ||||| || || | ||| ||||| | | | || || || ||||| | Sbjct 2825692 CGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGC 2825751 Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287 | || || || | || | || ||||| || | || | | ||| ||||| | |||| Sbjct 2825752 CACCTTGGTCAACATAGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGAATGAGGCCAT 2825811 Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 63345 |||| || |||||||| || | |||||| ||| | |||||||| | | ||||| Sbjct 2825812 TGGAAGTGCCATTGGTTCCGGCGATATAAGAGCCAGTAGCACGAATGCAGTGAGCATTGA 2825871 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 |||| || || || || | || ||||| | ||| ||| || | || || ||||| Sbjct 2825872 --GACCGATGCCGCCGGCAGTCTTGGAGATCATTGCACATGTCTTGAGTGTGTCGTAGAT 2825929 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465 |||||| || ||||| ||| |||| | | | || ||| |||| || || Sbjct 2825930 GCCCTCAATGCTATCTTCCTTCATATCGATCAAGAAGCAGGATGACAACTGAGCTTGAGG 2825989 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 || || || || || || || || || || |||||||| ||||| | || | || || Sbjct 2825990 TGTGCCGGCGTTGAACAACGTGGGCGACGCATGAGTAAAGCATTTCTGGGACATGAGGTT 2826049 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| |||| ||| || || | || | ||||| || || | |||||||| | Sbjct 2826050 GTATGTCTGAATGGCCTTCTCAACGTCGTCTCCGTGAATGCCAACAGACACACGCATAAG 2826109 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 ||||||||| |||| |||| ||| |||| ||| || || | | ||| ||| |||||| Sbjct 2826110 CATGTGCTGTGGTCGTTCAGCGA-CTTGCTTGCCGATCTTGAGGAGGTATGATCTTTCCA 2826168 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704 | || || || || || || | ||| |||||||| ||||| | ||| ||||||| | Sbjct 2826169 ACGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATGGCCGAGTTCA 2826228 Query 63705 GTTTATCCTTATATTTGTTAACTACATCCAT-GGTAATACTTGAAATAATAGGAAAATGT 63763 | ||| || ||| | || |||| ||| || ||||||| ||||| || | Sbjct 2826229 ACTCATCGGCATGTTTCATCAC-ACATTCATACGTCTCCTTTGAAATCATAGGGGAAGGC 2826287 Query 63764 TTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 63823 || || || || |||||||||| | | | ||| | || ||| |||| Sbjct 2826288 TTGTTGTTCTTGGGGTTGACATAGTAGTAAAGATCTGAGACGACGGAGGAGAATTGTTTC 2826347 Query 63824 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 63883 || |||| ||||| || || || ||||| || | || ||||| |||||||| || ||| Sbjct 2826348 TTGGTTTGCTTGTGGAGGTTGGACACGGCAATACGTGCTGCTAGGATGGCATAGTCGGGA 2826407 Query 63884 TG 63885 || Sbjct 2826408 TG 2826409 >seq1 Length=9941542 Score = 114 bits (126), Expect = 2e-20 Identities = 180/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 32742 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 || ||||| || ||||| || || |||||||| ||||| || ||||| || || || || Sbjct 8816714 TTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCAGCGAAC 8816655 Query 32802 GCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCG 32858 |||| |||||||| | | || | ||||| ||||| | | ||||| || Sbjct 8816654 GCAACAAGTCTCTGGGCGAAGGAGGAATCTTTGTCAGAGATCCATGTCAGGGCCCAGTCT 8816595 Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 32918 ||||||||| | ||||| || || || || |||| || | ||| | || | || Sbjct 8816594 GCCTTCTTTCGGATGCAAGGGATGGTGTCAATGGCATCGAACAAATAAGTCTTCTGCTTG 8816535 Query 32919 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 32978 | ||||| | |||||||| ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 8816534 TTGTCTTTGATGTATGTATCGATCAACAGACTGTACATCTCGGAATGGATGTTTTCAATC 8816475 Query 32979 GCCATTTGAAATCCGTA 32995 ||||| || | ||| Sbjct 8816474 ATGATTTGGAAACTGTA 8816458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631960398000