Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq3 89.7 4e-13 >seq1 Length=9941542 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || || | ||||| | || || ||||| Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| ||||| ||||| || ||||| Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGCATTCCTCCCGACCA 2174676 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||||||||||||| | ||||| | || || || |||||||||| Sbjct 2174675 ACAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGCGATTACAA 2174616 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| |||||||| || || ||| | || || Sbjct 2174615 CATTCAGAAAGAATCTACCCTCCATCTTGTCCT 2174583 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || | || || | ||||| ||||| ||| Sbjct 2174338 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACGATTACGCTGGAAGTCGAGTCTTCT 2174279 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| |||| | ||| ||||| || || || || |||||||| Sbjct 2174278 GATACCATCGACAACGTGAAGTCAAAGATTCAA-GACAAGGAGGGCATCCCCCCTGACCA 2174220 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || |||||||| || || || || |||| ||| ||| | || ||||| Sbjct 2174219 ACAACGCTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACTCTTTCTGACTACAA 2174160 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||| || || ||| || || || ||||| || || Sbjct 2174159 CATTCAGAAGGAGAGCACTCTGCACTTGGTGCTGAGACT 2174121 >seq3 Length=7151654 Score = 89.7 bits (98), Expect = 4e-13 Identities = 131/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || | ||||| |||| || ||||| || || |||||| Sbjct 5522585 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTATC 5522526 Query 25068 GA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCG 25123 || |||| || | || | || ||||| ||||| |||||||| || ||||| || Sbjct 5522525 GACAACGTCA---AATCCAAGATCCAA-GACAAGGAAGGCATTCCACCAGATCAACAACG 5522470 Query 25124 GATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCA 25183 | || ||||||||||||||| | || |||| || || || |||| ||||| ||||| Sbjct 5522469 TCTGATCTTTGCCGGCAAACAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATTCA 5522410 Query 25184 AAA 25186 || Sbjct 5522409 GAA 5522407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327973594075