Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq3 111 1e-19 >seq1 Length=9941542 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || ||||||||| | | Sbjct 2174566 ATGCAGATCTTTGTCAAGACCCTTACGGGCAAGACCATCACACTAGAAGTGGAATCATCA 2174507 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || |||||||||||||||||||| || ||||| ||| Sbjct 2174506 GACACGATCGACAACGTCAAGTCTAAGATTCAAGACAAGGAGGGTATCCCCCCCGACCAA 2174447 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || || ||||| ||||| || || | || ||||||| |||||| Sbjct 2174446 CAACGACTGATCTTCGCTGGCAAGCAGTTGGAAGACGGAAGAACACTCTCCGACTACAAC 2174387 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| || |||| || || || || |||| || ||| Sbjct 2174386 ATTCAGAAGGAATCTACACTACACTTGGTGCTGAGACTGCGAGGTGGT 2174339 Score = 127 bits (140), Expect = 2e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || ||| ||| ||||||| | ||| | ||||| Sbjct 2174998 ACCGGAAAGACCATCACCCTTGAGGTCGAATCCAGCGATACCATTGACAACGTCAAATCT 2174939 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || ||||| ||||||||||| ||||| || || ||||| || Sbjct 2174938 AAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAACAGCGTCTCATCTTCGCCGGAAAG 2174879 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || ||| ||||||| | |||||||||||| ||||| || || || | ||| Sbjct 2174878 CAGCTCGAAGATGGCCGCACCCTGAGCGATTACAACATCCAAAAGGAGTCTACACTCCAT 2174819 Query 22423 TTAGT 22427 || || Sbjct 2174818 TTGGT 2174814 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| ||| | || || || || |||| | || || || | | | Sbjct 2174794 ATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACTATCACCTTGGAGGTTGAGTCAAGC 2174735 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||| |||||||| || ||||| ||||| ||| Sbjct 2174734 GACACTATCGATAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAA 2174675 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||||||||| | || || ||| ||| | |||||||||| Sbjct 2174674 CAACGTCTAATCTTTGCCGGCAAACAACTTGAAGACGGCCGAACCCTGAGCGATTACAAC 2174615 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| |||||||| ||| | ||| Sbjct 2174614 ATTCAGAAAGAATCTACCCTCCAT 2174591 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || ||| | || || ||||| || | | Sbjct 2174338 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACGATTACGCTGGAAGTCGAGTCTTCT 2174279 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||| ||||||||||||||||| || || || || ||| Sbjct 2174278 GATACCATCGACAACGTGAAGTCAAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAA 2174219 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || |||||||| || ||||| |||||| || || | || || |||||| Sbjct 2174218 CAACGCTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGTCGTACTCTTTCTGACTACAAC 2174159 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 2174158 ATTCAGAAGGA 2174148 >seq3 Length=7151654 Score = 111 bits (122), Expect = 1e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || | ||||||| | ||| | ||||| Sbjct 5522570 ACGGGCAAGACTATCACCCTCGAGGTAGAGTCTTCCGATACTATCGACAACGTCAAATCC 5522511 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || |||||||| |||||||||||||| || |||||||||||| Sbjct 5522510 AAGATCCAAGACAAGGAAGGCATTCCACCAGATCAACAACGTCTGATCTTTGCCGGCAAA 5522451 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | |||||| ||| ||| | ||| ||||||||||| || Sbjct 5522450 CAACTCGAGGATGGCCGAACCCTGAGCGACTACAACATTCAGAA 5522407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727974422825